Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
PCNAP12004 AC025465.3-201ENST00000510570 311 ntBASIC1.95□□□□□ -2.1
PCNAP12004 RNU6-436P-201ENST00000516171 114 ntBASIC1.95□□□□□ -2.1
PCNAP12004 RNU6-1045P-201ENST00000516321 107 ntBASIC1.95□□□□□ -2.1
PCNAP12004 AP003733.2-201ENST00000529409 171 ntBASIC1.95□□□□□ -2.1
PCNAP12004 MIR4438-201ENST00000585271 93 ntBASIC1.95□□□□□ -2.1
PCNAP12004 U6.108-201ENST00000637764 58 ntBASIC1.95□□□□□ -2.1
PCNAP12004 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
PCNAP12004 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.94□□□□□ -2.1
PCNAP12004 Y_RNA.276-201ENST00000364732 109 ntBASIC1.94□□□□□ -2.1
PCNAP12004 RNU6-1105P-201ENST00000384774 107 ntBASIC1.94□□□□□ -2.1
PCNAP12004 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.94□□□□□ -2.1
PCNAP12004 RPL31P63-201ENST00000422565 375 ntBASIC1.94□□□□□ -2.1
PCNAP12004 AL358176.2-201ENST00000425769 204 ntBASIC1.94□□□□□ -2.1
PCNAP12004 MRPS10P1-201ENST00000448483 130 ntBASIC1.94□□□□□ -2.1
PCNAP12004 SNORA59A-201ENST00000459326 152 ntBASIC1.94□□□□□ -2.1
PCNAP12004 RPL23AP42-201ENST00000471152 471 ntBASIC1.94□□□□□ -2.1
PCNAP12004 TRBV12-1-201ENST00000479785 344 ntBASIC1.94□□□□□ -2.1
PCNAP12004 RNA5SP20-201ENST00000515976 84 ntBASIC1.94□□□□□ -2.1
PCNAP12004 RNU6-496P-201ENST00000516145 99 ntBASIC1.94□□□□□ -2.1
PCNAP12004 RNU6-1146P-201ENST00000516282 102 ntBASIC1.94□□□□□ -2.1
PCNAP12004 RNU6-63P-201ENST00000516690 95 ntBASIC1.94□□□□□ -2.1
PCNAP12004 RNU6-570P-201ENST00000517051 105 ntBASIC1.94□□□□□ -2.1
PCNAP12004 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.94□□□□□ -2.1
PCNAP12004 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
PCNAP12004 AL117187.1-201ENST00000555482 181 ntBASIC1.94□□□□□ -2.1
PCNAP12004 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.94□□□□□ -2.1
PCNAP12004 DEFB117-201ENST00000602356 141 ntBASIC1.94□□□□□ -2.1
PCNAP12004 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
PCNAP12004 AC010615.1-201ENST00000594254 1764 ntBASIC1.94□□□□□ -2.1
PCNAP12004 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCNAP12004 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PCNAP12004 SUMO2P12-201ENST00000405924 140 ntBASIC1.93□□□□□ -2.1
PCNAP12004 RPL23AP36-201ENST00000413895 458 ntBASIC1.93□□□□□ -2.1
PCNAP12004 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.93□□□□□ -2.1
PCNAP12004 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.93□□□□□ -2.1
PCNAP12004 CST2P1-201ENST00000425770 87 ntBASIC1.93□□□□□ -2.1
PCNAP12004 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.93□□□□□ -2.1
PCNAP12004 MTND2P29-201ENST00000438595 412 ntBASIC1.93□□□□□ -2.1
PCNAP12004 AL731563.1-201ENST00000442202 214 ntBASIC1.93□□□□□ -2.1
PCNAP12004 RNU7-128P-201ENST00000517247 62 ntBASIC1.93□□□□□ -2.1
PCNAP12004 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.93□□□□□ -2.1
PCNAP12004 U6.73-201ENST00000619194 103 ntBASIC1.93□□□□□ -2.1
PCNAP12004 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
PCNAP12004 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
PCNAP12004 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PCNAP12004 Y_RNA.172-201ENST00000363765 102 ntBASIC1.92□□□□□ -2.1
PCNAP12004 Y_RNA.361-201ENST00000365515 120 ntBASIC1.92□□□□□ -2.1
PCNAP12004 RNU6-505P-201ENST00000384427 107 ntBASIC1.92□□□□□ -2.1
PCNAP12004 Y_RNA.541-201ENST00000384640 113 ntBASIC1.92□□□□□ -2.1
PCNAP12004 MIR873-201ENST00000401120 77 ntBASIC1.92□□□□□ -2.1
PCNAP12004 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
PCNAP12004 AC245047.4-201ENST00000433189 144 ntBASIC1.92□□□□□ -2.1
PCNAP12004 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.92□□□□□ -2.1
PCNAP12004 SEPT14P8-201ENST00000508026 178 ntBASIC1.92□□□□□ -2.1
PCNAP12004 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.92□□□□□ -2.1
PCNAP12004 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.92□□□□□ -2.1
PCNAP12004 AL137100.2-201ENST00000555786 315 ntBASIC1.92□□□□□ -2.1
PCNAP12004 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
PCNAP12004 SNORD113-5-201ENST00000607261 78 ntBASIC1.92□□□□□ -2.1
PCNAP12004 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.92□□□□□ -2.1
PCNAP12004 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
PCNAP12004 AC092881.1-201ENST00000638218 2733 ntBASIC1.92□□□□□ -2.1
PCNAP12004 AL356292.1-201ENST00000283110 373 ntBASIC1.91□□□□□ -2.1
PCNAP12004 Y_RNA.16-201ENST00000362421 102 ntBASIC1.91□□□□□ -2.1
PCNAP12004 RNU1-22P-201ENST00000363334 158 ntBASIC1.91□□□□□ -2.1
PCNAP12004 Y_RNA.383-201ENST00000383855 97 ntBASIC1.91□□□□□ -2.1
PCNAP12004 Y_RNA.574-201ENST00000384766 95 ntBASIC1.91□□□□□ -2.1
PCNAP12004 Y_RNA.581-201ENST00000391017 97 ntBASIC1.91□□□□□ -2.1
PCNAP12004 RNA5SP323-201ENST00000391094 133 ntBASIC1.91□□□□□ -2.1
PCNAP12004 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
PCNAP12004 AL390729.2-201ENST00000416137 156 ntBASIC1.91□□□□□ -2.1
PCNAP12004 EBAG9P1-201ENST00000418955 543 ntBASIC1.91□□□□□ -2.1
PCNAP12004 RNA5SP57-201ENST00000459463 123 ntBASIC1.91□□□□□ -2.1
PCNAP12004 RPS26P55-201ENST00000471178 356 ntBASIC1.91□□□□□ -2.1
PCNAP12004 AC097462.1-201ENST00000514125 324 ntBASIC1.91□□□□□ -2.1
PCNAP12004 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.91□□□□□ -2.1
PCNAP12004 AC084364.2-201ENST00000546924 395 ntBASIC1.91□□□□□ -2.1
PCNAP12004 AC091544.4-201ENST00000555268 342 ntBASIC1.91□□□□□ -2.1
PCNAP12004 SUB1P4-201ENST00000566062 339 ntBASIC1.91□□□□□ -2.1
PCNAP12004 AC069114.2-201ENST00000604699 304 ntBASIC1.91□□□□□ -2.1
PCNAP12004 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
PCNAP12004 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
PCNAP12004 Y_RNA.47-201ENST00000362697 108 ntBASIC1.9□□□□□ -2.11
PCNAP12004 Y_RNA.84-201ENST00000363011 104 ntBASIC1.9□□□□□ -2.11
PCNAP12004 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
PCNAP12004 Y_RNA.133-201ENST00000363428 110 ntBASIC1.9□□□□□ -2.11
PCNAP12004 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.9□□□□□ -2.11
PCNAP12004 SNORA8-201ENST00000384574 139 ntBASIC1.9□□□□□ -2.11
PCNAP12004 RNU6-136P-201ENST00000384663 107 ntBASIC1.9□□□□□ -2.11
PCNAP12004 MIR568-201ENST00000385036 95 ntBASIC1.9□□□□□ -2.11
PCNAP12004 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
PCNAP12004 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
PCNAP12004 POLR2KP2-201ENST00000438155 177 ntBASIC1.9□□□□□ -2.11
PCNAP12004 AL606517.2-201ENST00000442855 241 ntBASIC1.9□□□□□ -2.11
PCNAP12004 AL163195.1-201ENST00000496941 348 ntBASIC1.9□□□□□ -2.11
PCNAP12004 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
PCNAP12004 RNU7-172P-201ENST00000517125 64 ntBASIC1.9□□□□□ -2.11
PCNAP12004 MIR3684-201ENST00000579779 74 ntBASIC1.9□□□□□ -2.11
PCNAP12004 MIR5089-201ENST00000580047 84 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms