Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC112693.2-201ENST00000556538 232 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.14□□□□□ -2.43
FREM3P0C091 Z84480.1-201ENST00000605131 311 ntBASIC-0.14□□□□□ -2.43
FREM3P0C091 SNORA27.1-201ENST00000362604 124 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 RNU6-407P-201ENST00000365280 104 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 RNU6-46P-201ENST00000383860 107 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 SNORD38C-201ENST00000384381 69 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
FREM3P0C091 AC009961.2-201ENST00000435771 251 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 AC104850.1-201ENST00000435940 476 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 RNU6-189P-201ENST00000516120 101 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 RNU6-430P-201ENST00000517078 107 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 AP002963.1-201ENST00000530590 184 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 AC005592.1-201ENST00000566527 1640 ntBASIC-0.15□□□□□ -2.43
FREM3P0C091 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 SNORD14.1-201ENST00000365609 90 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 SNORD42A-201ENST00000459584 64 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 AP000870.1-201ENST00000472927 406 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 MTND1P22-201ENST00000510572 951 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 MIR4703-201ENST00000577728 79 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 AC064836.2-201ENST00000609491 462 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 AL008636.1-201ENST00000625038 1018 ntBASIC-0.16□□□□□ -2.43
FREM3P0C091 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.16□□□□□ -2.43
FREM3P0C091 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 Y_RNA.179-201ENST00000363844 90 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 MIR516B2-201ENST00000385190 85 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 RNA5SP496-201ENST00000391240 109 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 ZNF885P-201ENST00000420174 1098 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 AC091133.4-201ENST00000511142 308 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 SNORA18.6-201ENST00000516792 115 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 RNU6-341P-201ENST00000516973 96 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.16□□□□□ -2.44
FREM3P0C091 MIR548AO-201ENST00000579992 96 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 MIR4775-201ENST00000581168 75 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 AC245014.2-201ENST00000603689 287 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 AC246785.4-201ENST00000605374 287 ntBASIC-0.16□□□□□ -2.44
FREM3P0C091 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
FREM3P0C091 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 RNU6-606P-201ENST00000384721 111 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 SNORA75.6-201ENST00000391318 127 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 FGFR1OP2P1-201ENST00000395943 500 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 RN7SKP142-201ENST00000411236 328 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.17□□□□□ -2.44
FREM3P0C091 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.17□□□□□ -2.44
FREM3P0C091 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.17□□□□□ -2.44
FREM3P0C091 MTND4P7-201ENST00000523876 130 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 AL158050.2-201ENST00000605336 568 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 MIR8076-201ENST00000611401 83 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 AC090517.2-201ENST00000614966 680 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 MIR4251-201ENST00000635819 61 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 RNU6-873P-201ENST00000363833 107 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.17□□□□□ -2.44
FREM3P0C091 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 RNU6-205P-201ENST00000390858 107 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 MTCO3P19-201ENST00000415864 321 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 MTND4P32-201ENST00000437189 1237 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.17□□□□□ -2.44
FREM3P0C091 AC107401.1-201ENST00000503426 685 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 RNU4-49P-201ENST00000516080 140 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-0.17□□□□□ -2.44
FREM3P0C091 ELOCP32-201ENST00000548625 324 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 AC018448.1-201ENST00000552843 316 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 PIGPP4-201ENST00000584447 307 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 MIR4999-201ENST00000585029 91 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 AP000753.3-201ENST00000604083 169 ntBASIC-0.17□□□□□ -2.44
FREM3P0C091 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.17□□□□□ -2.44
FREM3P0C091 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.17□□□□□ -2.44
FREM3P0C091 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 SNORD114-31-201ENST00000363219 75 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 RNU6-82P-201ENST00000363970 107 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 RNU6-169P-201ENST00000365336 107 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 RNU6-157P-201ENST00000383957 107 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 RNU6-929P-201ENST00000384429 107 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 MIR15B-201ENST00000385045 98 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 MCFD2P1-201ENST00000417812 300 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 AL512326.2-201ENST00000426359 151 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 MTCO3P38-201ENST00000468910 766 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.18□□□□□ -2.44
FREM3P0C091 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-0.18□□□□□ -2.44
FREM3P0C091 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
FREM3P0C091 RNA5SP98-201ENST00000363158 137 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 RNU6-181P-201ENST00000363225 107 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 AC117470.1-201ENST00000381974 330 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 SNORA69-201ENST00000383895 132 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 MIR136-201ENST00000385207 82 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 RNU6-679P-201ENST00000391003 106 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 MTCO2P33-201ENST00000402100 465 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 MIR1298-201ENST00000408783 112 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 RNU6-325P-201ENST00000411132 105 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.19□□□□□ -2.44
FREM3P0C091 RNU6-445P-201ENST00000516949 107 ntBASIC-0.19□□□□□ -2.44
FREM3P0C091 AL355375.2-201ENST00000574825 175 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms