Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-580P-201ENST00000365159 107 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 SNORD14.1-201ENST00000365609 90 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.58□□□□□ -2.5
SPTA1P02549 AC013470.1-201ENST00000453438 462 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-0.58□□□□□ -2.5
SPTA1P02549 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.58□□□□□ -2.5
SPTA1P02549 MTATP6P2-201ENST00000603319 678 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC144521.1-201ENST00000607148 956 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC027279.3-201ENST00000625055 122 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU6-245P-201ENST00000384020 107 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU2-54P-201ENST00000410299 190 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AL117339.3-201ENST00000418733 162 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 MTND1P32-201ENST00000433043 938 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC069271.1-201ENST00000445577 156 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 MTND1P17-201ENST00000448961 204 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU7-62P-201ENST00000458856 62 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU7-140P-201ENST00000459546 60 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC016632.1-201ENST00000503994 196 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC097462.1-201ENST00000514125 324 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU7-128P-201ENST00000517247 62 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AL355375.2-201ENST00000574825 175 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC091178.2-201ENST00000584401 117 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 AC174048.1-201ENST00000603389 144 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 uc_338.4-201ENST00000616635 176 ntBASIC-0.58□□□□□ -2.5
SPTA1P02549 MTND4P9-201ENST00000507819 1346 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 RNA5SP117-201ENST00000365294 118 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 MIR19A-201ENST00000384878 82 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.59□□□□□ -2.5
SPTA1P02549 SUMO1P3-201ENST00000439961 304 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.59□□□□□ -2.5
SPTA1P02549 RPL39P34-201ENST00000477141 156 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 MTND2P38-201ENST00000522536 667 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AC245008.1-201ENST00000608123 476 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 MIR7107-201ENST00000611489 80 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.59□□□□□ -2.5
SPTA1P02549 RNU6-353P-201ENST00000364266 108 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AL355994.1-201ENST00000424379 260 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 SNAP23P1-201ENST00000433229 246 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 Z98949.2-201ENST00000440996 144 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.59□□□□□ -2.5
SPTA1P02549 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.59□□□□□ -2.5
SPTA1P02549 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 MTND5P34-201ENST00000568888 325 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 MIR4639-201ENST00000584938 69 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 SNORD92-201ENST00000585078 85 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AP001033.2-201ENST00000609701 1003 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AC084368.1-201ENST00000620935 65 ntBASIC-0.59□□□□□ -2.5
SPTA1P02549 AC005592.1-201ENST00000566527 1640 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 SNORD115-8-201ENST00000363856 82 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 SNORD115-38-201ENST00000365037 82 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 RNU6-480P-201ENST00000384332 107 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 AL390729.2-201ENST00000416137 156 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 MTND4LP14-201ENST00000429447 288 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 AC079781.2-201ENST00000446424 169 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 MTND4P18-201ENST00000447010 465 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC-0.6□□□□□ -2.51
SPTA1P02549 MIR6828-201ENST00000636181 60 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 SNORD28-201ENST00000384706 75 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 MIR1257-201ENST00000408490 117 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.6□□□□□ -2.51
SPTA1P02549 MTCO1P20-201ENST00000425366 358 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 AC133104.1-201ENST00000429100 218 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.6□□□□□ -2.51
SPTA1P02549 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.6□□□□□ -2.51
SPTA1P02549 USP9YP25-201ENST00000457708 443 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 SNORD54-201ENST00000459159 67 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 AC008628.2-201ENST00000502605 298 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 AC005178.1-201ENST00000508392 440 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.6□□□□□ -2.51
SPTA1P02549 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.6□□□□□ -2.51
SPTA1P02549 SNORA2.2-201ENST00000365473 135 ntBASIC-0.61□□□□□ -2.51
SPTA1P02549 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.61□□□□□ -2.51
SPTA1P02549 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.61□□□□□ -2.51
SPTA1P02549 RNU6-221P-201ENST00000459541 99 ntBASIC-0.61□□□□□ -2.51
SPTA1P02549 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.61□□□□□ -2.51
SPTA1P02549 RNU7-43P-201ENST00000516554 64 ntBASIC-0.61□□□□□ -2.51
SPTA1P02549 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.61□□□□□ -2.51
SPTA1P02549 AC105029.1-201ENST00000520250 669 ntBASIC-0.61□□□□□ -2.51
SPTA1P02549 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.61□□□□□ -2.51
SPTA1P02549 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.61□□□□□ -2.51
SPTA1P02549 AL358944.1-201ENST00000528537 144 ntBASIC-0.61□□□□□ -2.51
SPTA1P02549 SNORA69-201ENST00000383895 132 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 SNORA67.2-201ENST00000384300 149 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.62□□□□□ -2.51
SPTA1P02549 RPL39P25-201ENST00000449384 154 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 RPS29P27-201ENST00000463711 170 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 HSPE1P23-201ENST00000509838 286 ntBASIC-0.62□□□□□ -2.51
SPTA1P02549 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms