Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 MTND1P5-201ENST00000517906 940 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 AL512310.8-201ENST00000550183 120 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 SNORD11B-201ENST00000607707 90 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 AC015540.1-201ENST00000615828 501 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 SCARNA4-201ENST00000629045 128 ntBASIC0.54□□□□□ -2.32
COL4A1P02462 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
COL4A1P02462 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.53□□□□□ -2.32
COL4A1P02462 RNY1P16-201ENST00000363063 111 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 RNU6-595P-201ENST00000363944 107 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 RNU4-75P-201ENST00000364621 146 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 RNU4-9P-201ENST00000364951 139 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 Y_RNA.318-201ENST00000365131 97 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 Y_RNA.414-201ENST00000384011 101 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 RNU6-950P-201ENST00000384651 107 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 MIR10B-201ENST00000385011 110 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 MIR653-201ENST00000385279 96 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AL356776.1-201ENST00000406574 447 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC016907.1-201ENST00000419483 435 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 USP9YP30-201ENST00000430729 455 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 MTATP6P26-201ENST00000445926 662 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC074133.1-201ENST00000515696 183 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC027288.2-201ENST00000553028 243 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AL121579.1-201ENST00000555129 305 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC146944.4-201ENST00000602697 718 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AL513534.2-201ENST00000603836 250 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC010999.1-201ENST00000611856 324 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC106800.4-201ENST00000614905 153 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC048344.4-201ENST00000619744 527 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC090617.10-201ENST00000624308 134 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 AC068137.4-201ENST00000638485 296 ntBASIC0.53□□□□□ -2.32
COL4A1P02462 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
COL4A1P02462 RNU6-534P-201ENST00000364877 106 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 SNORA25-201ENST00000384384 134 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 Y_RNA.490-201ENST00000384413 102 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 RNA5SP109-201ENST00000391010 116 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 MTCYBP4-201ENST00000401524 249 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.53□□□□□ -2.33
COL4A1P02462 MTATP6P13-201ENST00000438531 667 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.53□□□□□ -2.33
COL4A1P02462 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 AL049830.1-201ENST00000468034 425 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 RNU6-947P-201ENST00000516264 106 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 SNORA31.10-201ENST00000516482 106 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.53□□□□□ -2.33
COL4A1P02462 MIR4802-201ENST00000581881 80 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 AL390123.1-201ENST00000603216 237 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 AC099654.5-201ENST00000636479 350 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 MIR3662-201ENST00000637030 95 ntBASIC0.53□□□□□ -2.33
COL4A1P02462 RNU5F-3P-201ENST00000363767 117 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 SNORA2A-201ENST00000383885 135 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 Y_RNA.405-201ENST00000383979 100 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 Y_RNA.451-201ENST00000384200 100 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 RNU6-842P-201ENST00000384269 107 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 Y_RNA.524-201ENST00000384564 100 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 Y_RNA.561-201ENST00000384694 100 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 RNU6-95P-201ENST00000384697 107 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 MTND3P23-201ENST00000431980 347 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 RNA5SP20-201ENST00000515976 84 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 RN7SKP88-201ENST00000516847 250 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 RNA5SP454-201ENST00000517231 127 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.52□□□□□ -2.33
COL4A1P02462 MIR3942-201ENST00000585264 109 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 MIR4438-201ENST00000585271 93 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 AC080013.6-201ENST00000606185 215 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 7SK.8-201ENST00000612110 250 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 7SK.11-201ENST00000615477 250 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 MIR6128-201ENST00000615528 109 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 7SK.13-201ENST00000622040 250 ntBASIC0.52□□□□□ -2.33
COL4A1P02462 Y_RNA.48-201ENST00000362710 103 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU6-451P-201ENST00000362921 107 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 SNORA33-201ENST00000363664 130 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 U3.8-201ENST00000363675 217 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU4-24P-201ENST00000364565 139 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 Y_RNA.319-201ENST00000365138 92 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNA5SP259-201ENST00000365541 109 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU6-1031P-201ENST00000384773 107 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
COL4A1P02462 AL355796.1-201ENST00000406706 323 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU6-1156P-201ENST00000410365 100 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU2-16P-201ENST00000410712 136 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.51□□□□□ -2.33
COL4A1P02462 AC005002.2-201ENST00000438228 269 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 AC048334.1-201ENST00000477975 159 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RPS29P25-201ENST00000481709 171 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU6-864P-201ENST00000516256 108 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU1-117P-201ENST00000517041 158 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 AC027419.1-201ENST00000522976 328 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 AC097065.2-201ENST00000608159 533 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 GHRLOS.1-201ENST00000610995 70 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 AC106754.2-201ENST00000623006 233 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
COL4A1P02462 RNU6-1123P-201ENST00000362347 106 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RNU1-124P-201ENST00000363861 145 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
COL4A1P02462 MRPL35P1-201ENST00000404272 572 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 RNA5SP504-201ENST00000410676 117 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.5□□□□□ -2.33
COL4A1P02462 AC016909.1-201ENST00000415916 166 ntBASIC0.5□□□□□ -2.33
COL4A1P02462 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms