Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL355375.2-201ENST00000574825 175 ntBASIC-0.71□□□□□ -2.52
TNFP01375 MIR5692A1-201ENST00000580523 69 ntBASIC-0.71□□□□□ -2.52
TNFP01375 MIR4280-201ENST00000582178 76 ntBASIC-0.71□□□□□ -2.52
TNFP01375 MIR544B-201ENST00000582372 78 ntBASIC-0.71□□□□□ -2.52
TNFP01375 MIR4438-201ENST00000585271 93 ntBASIC-0.71□□□□□ -2.52
TNFP01375 BNIP3P26-201ENST00000600827 554 ntBASIC-0.71□□□□□ -2.52
TNFP01375 AC120024.3-201ENST00000603167 156 ntBASIC-0.71□□□□□ -2.52
TNFP01375 RNU6-86P-201ENST00000606534 107 ntBASIC-0.71□□□□□ -2.52
TNFP01375 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.71□□□□□ -2.52
TNFP01375 AC078880.5-201ENST00000617845 421 ntBASIC-0.71□□□□□ -2.52
TNFP01375 AC027279.3-201ENST00000625055 122 ntBASIC-0.71□□□□□ -2.52
TNFP01375 U8.6-201ENST00000364939 135 ntBASIC-0.72□□□□□ -2.52
TNFP01375 RNU6-652P-201ENST00000365488 107 ntBASIC-0.72□□□□□ -2.52
TNFP01375 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.72□□□□□ -2.52
TNFP01375 SNORD83B-201ENST00000386745 93 ntBASIC-0.72□□□□□ -2.52
TNFP01375 MT-TN-201ENST00000387400 73 ntBASIC-0.72□□□□□ -2.52
TNFP01375 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-0.72□□□□□ -2.52
TNFP01375 AL353572.1-201ENST00000442490 417 ntBASIC-0.72□□□□□ -2.52
TNFP01375 MRPS10P1-201ENST00000448483 130 ntBASIC-0.72□□□□□ -2.52
TNFP01375 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-0.72□□□□□ -2.52
TNFP01375 snoU13.19-201ENST00000459148 104 ntBASIC-0.72□□□□□ -2.52
TNFP01375 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.72□□□□□ -2.52
TNFP01375 RNU6-341P-201ENST00000516973 96 ntBASIC-0.72□□□□□ -2.52
TNFP01375 MTND2P38-201ENST00000522536 667 ntBASIC-0.72□□□□□ -2.52
TNFP01375 AC123904.2-201ENST00000548059 300 ntBASIC-0.72□□□□□ -2.52
TNFP01375 AP001330.5-201ENST00000607176 411 ntBASIC-0.72□□□□□ -2.52
TNFP01375 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.72□□□□□ -2.52
TNFP01375 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
TNFP01375 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.73□□□□□ -2.53
TNFP01375 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.73□□□□□ -2.53
TNFP01375 SNORD115-41-201ENST00000363608 82 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-236P-201ENST00000363886 106 ntBASIC-0.73□□□□□ -2.53
TNFP01375 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-468P-201ENST00000384003 109 ntBASIC-0.73□□□□□ -2.53
TNFP01375 SNORA24.1-201ENST00000384401 135 ntBASIC-0.73□□□□□ -2.53
TNFP01375 SNORD56B-201ENST00000384713 71 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-447P-201ENST00000410293 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-355P-201ENST00000410427 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-791P-201ENST00000410467 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-860P-201ENST00000410860 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-785P-201ENST00000411324 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 AC090844.1-201ENST00000422019 156 ntBASIC-0.73□□□□□ -2.53
TNFP01375 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.73□□□□□ -2.53
TNFP01375 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.73□□□□□ -2.53
TNFP01375 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
TNFP01375 RNU6-881P-201ENST00000516813 102 ntBASIC-0.73□□□□□ -2.53
TNFP01375 RNA5SP337-201ENST00000517007 109 ntBASIC-0.73□□□□□ -2.53
TNFP01375 AP002004.2-201ENST00000531656 154 ntBASIC-0.73□□□□□ -2.53
TNFP01375 SNORD92-201ENST00000585078 85 ntBASIC-0.73□□□□□ -2.53
TNFP01375 Z94722.1-201ENST00000604328 474 ntBASIC-0.73□□□□□ -2.53
TNFP01375 AC016597.2-201ENST00000613256 341 ntBASIC-0.73□□□□□ -2.53
TNFP01375 U6.90-201ENST00000614007 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 U6.70-201ENST00000620287 104 ntBASIC-0.73□□□□□ -2.53
TNFP01375 AC139792.3-201ENST00000623525 224 ntBASIC-0.73□□□□□ -2.53
TNFP01375 MIR101-2-201ENST00000362195 79 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU6-462P-201ENST00000362659 105 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU4-21P-201ENST00000362802 126 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU4-32P-201ENST00000363404 141 ntBASIC-0.74□□□□□ -2.53
TNFP01375 SNORD95.1-201ENST00000364099 68 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU4-66P-201ENST00000365199 138 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU6-125P-201ENST00000384505 107 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU6-205P-201ENST00000390858 107 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNU6-298P-201ENST00000390888 96 ntBASIC-0.74□□□□□ -2.53
TNFP01375 RNA5SP475-201ENST00000410568 110 ntBASIC-0.74□□□□□ -2.53
TNFP01375 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-0.74□□□□□ -2.53
TNFP01375 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-0.74□□□□□ -2.53
TNFP01375 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.74□□□□□ -2.53
TNFP01375 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.74□□□□□ -2.53
TNFP01375 AL512326.2-201ENST00000426359 151 ntBASIC-0.74□□□□□ -2.53
TNFP01375 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.74□□□□□ -2.53
TNFP01375 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.74□□□□□ -2.53
TNFP01375 SCARNA18B-201ENST00000458806 135 ntBASIC-0.74□□□□□ -2.53
TNFP01375 SCARNA18-201ENST00000459004 134 ntBASIC-0.74□□□□□ -2.53
TNFP01375 SNORD123-201ENST00000459473 70 ntBASIC-0.74□□□□□ -2.53
TNFP01375 HAR1A.1-201ENST00000459583 118 ntBASIC-0.74□□□□□ -2.53
TNFP01375 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.74□□□□□ -2.53
TNFP01375 AC091959.1-201ENST00000495857 238 ntBASIC-0.74□□□□□ -2.53
TNFP01375 SCARNA1-201ENST00000517138 166 ntBASIC-0.74□□□□□ -2.53
TNFP01375 AGGF1P4-201ENST00000568249 801 ntBASIC-0.74□□□□□ -2.53
TNFP01375 MTND1P8-201ENST00000571424 950 ntBASIC-0.74□□□□□ -2.53
TNFP01375 AP000907.4-201ENST00000604143 237 ntBASIC-0.74□□□□□ -2.53
TNFP01375 AC121247.2-201ENST00000604776 136 ntBASIC-0.74□□□□□ -2.53
TNFP01375 AC091965.4-201ENST00000607691 587 ntBASIC-0.74□□□□□ -2.53
TNFP01375 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.74□□□□□ -2.53
TNFP01375 AC099786.3-201ENST00000565735 1410 ntBASIC-0.74□□□□□ -2.53
TNFP01375 SNORD114-15-201ENST00000364687 72 ntBASIC-0.75□□□□□ -2.53
TNFP01375 RNA5SP117-201ENST00000365294 118 ntBASIC-0.75□□□□□ -2.53
TNFP01375 RNU6-396P-201ENST00000365369 105 ntBASIC-0.75□□□□□ -2.53
TNFP01375 AC117470.1-201ENST00000381974 330 ntBASIC-0.75□□□□□ -2.53
TNFP01375 RNU6-431P-201ENST00000383874 107 ntBASIC-0.75□□□□□ -2.53
TNFP01375 SNORA1-201ENST00000384107 130 ntBASIC-0.75□□□□□ -2.53
TNFP01375 SNORD28-201ENST00000384706 75 ntBASIC-0.75□□□□□ -2.53
TNFP01375 SNORA40.2-201ENST00000390847 128 ntBASIC-0.75□□□□□ -2.53
TNFP01375 UQCRBP2-201ENST00000447827 297 ntBASIC-0.75□□□□□ -2.53
TNFP01375 RNU7-182P-201ENST00000459009 62 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms