Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 AC005840.1-201ENST00000498412 377 ntBASIC1.82□□□□□ -2.12
DDX58O95786 MIR4421-201ENST00000578133 69 ntBASIC1.82□□□□□ -2.12
DDX58O95786 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.82□□□□□ -2.12
DDX58O95786 AC092447.9-201ENST00000603395 144 ntBASIC1.82□□□□□ -2.12
DDX58O95786 LARP7P1-201ENST00000605576 316 ntBASIC1.82□□□□□ -2.12
DDX58O95786 U6.73-201ENST00000619194 103 ntBASIC1.82□□□□□ -2.12
DDX58O95786 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
DDX58O95786 Y_RNA.226-201ENST00000364337 114 ntBASIC1.81□□□□□ -2.12
DDX58O95786 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.81□□□□□ -2.12
DDX58O95786 SNORA20B-201ENST00000384220 132 ntBASIC1.81□□□□□ -2.12
DDX58O95786 SNORD78.2-201ENST00000391076 69 ntBASIC1.81□□□□□ -2.12
DDX58O95786 SNRPGP13-201ENST00000442212 177 ntBASIC1.81□□□□□ -2.12
DDX58O95786 FCF1P4-201ENST00000448326 183 ntBASIC1.81□□□□□ -2.12
DDX58O95786 RNU6-1170P-201ENST00000515974 106 ntBASIC1.81□□□□□ -2.12
DDX58O95786 MIR3684-201ENST00000579779 74 ntBASIC1.81□□□□□ -2.12
DDX58O95786 MIR4422-201ENST00000581938 83 ntBASIC1.81□□□□□ -2.12
DDX58O95786 VN1R91P-201ENST00000594377 169 ntBASIC1.81□□□□□ -2.12
DDX58O95786 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.81□□□□□ -2.12
DDX58O95786 AC011476.5-201ENST00000615594 130 ntBASIC1.81□□□□□ -2.12
DDX58O95786 AC104985.2-201ENST00000620598 500 ntBASIC1.81□□□□□ -2.12
DDX58O95786 Y_RNA.39-201ENST00000362620 98 ntBASIC1.8□□□□□ -2.12
DDX58O95786 SNORA7.1-201ENST00000363750 139 ntBASIC1.8□□□□□ -2.12
DDX58O95786 SNORA4.2-201ENST00000365313 147 ntBASIC1.8□□□□□ -2.12
DDX58O95786 RNY3P4-201ENST00000384428 101 ntBASIC1.8□□□□□ -2.12
DDX58O95786 MIR320A-201ENST00000385302 82 ntBASIC1.8□□□□□ -2.12
DDX58O95786 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.8□□□□□ -2.12
DDX58O95786 MTCO3P19-201ENST00000415864 321 ntBASIC1.8□□□□□ -2.12
DDX58O95786 AC092473.1-201ENST00000441098 221 ntBASIC1.8□□□□□ -2.12
DDX58O95786 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.8□□□□□ -2.12
DDX58O95786 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.8□□□□□ -2.12
DDX58O95786 RNU7-99P-201ENST00000516271 62 ntBASIC1.8□□□□□ -2.12
DDX58O95786 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.8□□□□□ -2.12
DDX58O95786 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.8□□□□□ -2.12
DDX58O95786 AC023442.1-201ENST00000531247 422 ntBASIC1.8□□□□□ -2.12
DDX58O95786 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.8□□□□□ -2.12
DDX58O95786 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.8□□□□□ -2.12
DDX58O95786 AC004467.1-201ENST00000615678 330 ntBASIC1.8□□□□□ -2.12
DDX58O95786 AC006435.5-201ENST00000624486 112 ntBASIC1.8□□□□□ -2.12
DDX58O95786 RNU6-961P-201ENST00000363893 105 ntBASIC1.79□□□□□ -2.12
DDX58O95786 RNU6-338P-201ENST00000383888 105 ntBASIC1.79□□□□□ -2.12
DDX58O95786 RNU6-708P-201ENST00000384217 107 ntBASIC1.79□□□□□ -2.12
DDX58O95786 RNU11-5P-201ENST00000391216 129 ntBASIC1.79□□□□□ -2.12
DDX58O95786 AL355796.1-201ENST00000406706 323 ntBASIC1.79□□□□□ -2.12
DDX58O95786 AF228730.4-201ENST00000421457 183 ntBASIC1.79□□□□□ -2.12
DDX58O95786 MRPS10P1-201ENST00000448483 130 ntBASIC1.79□□□□□ -2.12
DDX58O95786 RNU6-976P-201ENST00000516086 111 ntBASIC1.79□□□□□ -2.12
DDX58O95786 AP002001.1-203ENST00000534002 267 ntBASIC1.79□□□□□ -2.12
DDX58O95786 SNORA77B-201ENST00000578179 125 ntBASIC1.79□□□□□ -2.12
DDX58O95786 MIR4659A-201ENST00000580269 81 ntBASIC1.79□□□□□ -2.12
DDX58O95786 AC138305.3-201ENST00000624988 240 ntBASIC1.79□□□□□ -2.12
DDX58O95786 MIR337-201ENST00000362281 93 ntBASIC1.78□□□□□ -2.12
DDX58O95786 RNU6-1115P-201ENST00000362490 106 ntBASIC1.78□□□□□ -2.12
DDX58O95786 Y_RNA.315-201ENST00000365117 102 ntBASIC1.78□□□□□ -2.12
DDX58O95786 Y_RNA.431-201ENST00000384086 102 ntBASIC1.78□□□□□ -2.12
DDX58O95786 RPL21P1-201ENST00000399532 476 ntBASIC1.78□□□□□ -2.12
DDX58O95786 AC004965.1-201ENST00000413033 213 ntBASIC1.78□□□□□ -2.12
DDX58O95786 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.78□□□□□ -2.12
DDX58O95786 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
DDX58O95786 CHEK2P4-201ENST00000450340 246 ntBASIC1.78□□□□□ -2.12
DDX58O95786 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.78□□□□□ -2.12
DDX58O95786 AC079140.2-201ENST00000506193 142 ntBASIC1.78□□□□□ -2.12
DDX58O95786 TRMT112P2-201ENST00000512910 132 ntBASIC1.78□□□□□ -2.12
DDX58O95786 RNU6-911P-201ENST00000516523 104 ntBASIC1.78□□□□□ -2.12
DDX58O95786 RNU7-172P-201ENST00000517125 64 ntBASIC1.78□□□□□ -2.12
DDX58O95786 RPL21P9-201ENST00000556149 474 ntBASIC1.78□□□□□ -2.12
DDX58O95786 AL117336.2-201ENST00000602435 335 ntBASIC1.78□□□□□ -2.12
DDX58O95786 AP001485.1-201ENST00000604799 199 ntBASIC1.78□□□□□ -2.12
DDX58O95786 AL133255.1-201ENST00000606374 441 ntBASIC1.78□□□□□ -2.12
DDX58O95786 U6.115-201ENST00000636045 103 ntBASIC1.78□□□□□ -2.12
DDX58O95786 U6.108-201ENST00000637764 58 ntBASIC1.78□□□□□ -2.12
DDX58O95786 WWP1P1-201ENST00000466609 2769 ntBASIC1.78□□□□□ -2.12
DDX58O95786 MIR410-201ENST00000362222 80 ntBASIC1.77□□□□□ -2.13
DDX58O95786 Y_RNA.27-201ENST00000362540 103 ntBASIC1.77□□□□□ -2.13
DDX58O95786 RNU6-271P-201ENST00000363858 105 ntBASIC1.77□□□□□ -2.13
DDX58O95786 RNU6-454P-201ENST00000364292 107 ntBASIC1.77□□□□□ -2.13
DDX58O95786 Y_RNA.419-201ENST00000384041 102 ntBASIC1.77□□□□□ -2.13
DDX58O95786 RN7SKP200-201ENST00000410564 320 ntBASIC1.77□□□□□ -2.13
DDX58O95786 AC245047.3-201ENST00000429428 127 ntBASIC1.77□□□□□ -2.13
DDX58O95786 RNU7-94P-201ENST00000459576 63 ntBASIC1.77□□□□□ -2.13
DDX58O95786 RNA5SP20-201ENST00000515976 84 ntBASIC1.77□□□□□ -2.13
DDX58O95786 AC006380.1-201ENST00000603598 186 ntBASIC1.77□□□□□ -2.13
DDX58O95786 AC073413.2-201ENST00000604332 360 ntBASIC1.77□□□□□ -2.13
DDX58O95786 AC006157.1-201ENST00000611750 366 ntBASIC1.77□□□□□ -2.13
DDX58O95786 AC095038.3-201ENST00000634439 195 ntBASIC1.77□□□□□ -2.13
DDX58O95786 MIR4272-201ENST00000635924 64 ntBASIC1.77□□□□□ -2.13
DDX58O95786 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
DDX58O95786 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
DDX58O95786 AL391987.6-201ENST00000305671 199 ntBASIC1.76□□□□□ -2.13
DDX58O95786 Y_RNA.5-201ENST00000362334 102 ntBASIC1.76□□□□□ -2.13
DDX58O95786 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
DDX58O95786 RNY1P10-201ENST00000363268 113 ntBASIC1.76□□□□□ -2.13
DDX58O95786 RNU6-626P-201ENST00000363354 107 ntBASIC1.76□□□□□ -2.13
DDX58O95786 Y_RNA.197-201ENST00000364004 102 ntBASIC1.76□□□□□ -2.13
DDX58O95786 Y_RNA.496-201ENST00000384444 101 ntBASIC1.76□□□□□ -2.13
DDX58O95786 RNU1-78P-201ENST00000391248 165 ntBASIC1.76□□□□□ -2.13
DDX58O95786 MIR1287-201ENST00000408492 90 ntBASIC1.76□□□□□ -2.13
DDX58O95786 RPS20P15-201ENST00000412792 311 ntBASIC1.76□□□□□ -2.13
DDX58O95786 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.76□□□□□ -2.13
DDX58O95786 AC010154.1-201ENST00000425857 269 ntBASIC1.76□□□□□ -2.13
DDX58O95786 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms