Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU6-221P-201ENST00000459541 99 ntBASIC3□□□□□ -1.93
RAPGEF3O95398 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3□□□□□ -1.93
RAPGEF3O95398 MIR3128-201ENST00000581957 66 ntBASIC3□□□□□ -1.93
RAPGEF3O95398 SNORA4-201ENST00000584302 138 ntBASIC3□□□□□ -1.93
RAPGEF3O95398 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
RAPGEF3O95398 SNORA25.1-201ENST00000362326 128 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 Y_RNA.20-201ENST00000362479 113 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 RNU6-379P-201ENST00000363813 104 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 RNU6-743P-201ENST00000364151 106 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 SNORA20.1-201ENST00000364790 130 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 RNU6-514P-201ENST00000384208 107 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 RNU6-1248P-201ENST00000391096 64 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 U3.40-201ENST00000408706 208 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 AC024067.1-201ENST00000426199 223 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 AL357134.1-201ENST00000445848 426 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 RPL23AP3-201ENST00000453844 468 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 SCARNA24.2-201ENST00000516968 130 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 PRELID2P1-201ENST00000552837 301 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 MIR5089-201ENST00000580047 84 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 AC005828.6-201ENST00000606610 232 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 MIR8081-201ENST00000611533 95 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 U2.14-201ENST00000615943 113 ntBASIC2.99□□□□□ -1.93
RAPGEF3O95398 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.99□□□□□ -1.93
RAPGEF3O95398 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RAPGEF3O95398 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
RAPGEF3O95398 SNORD114-7-201ENST00000362520 77 ntBASIC2.98□□□□□ -1.93
RAPGEF3O95398 MTND1P19-201ENST00000511780 315 ntBASIC2.98□□□□□ -1.93
RAPGEF3O95398 RNU6-966P-201ENST00000516479 104 ntBASIC2.98□□□□□ -1.93
RAPGEF3O95398 SNORA25.15-201ENST00000516487 89 ntBASIC2.98□□□□□ -1.93
RAPGEF3O95398 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.98□□□□□ -1.93
RAPGEF3O95398 BX284668.6-201ENST00000606899 438 ntBASIC2.98□□□□□ -1.93
RAPGEF3O95398 U6.115-201ENST00000636045 103 ntBASIC2.98□□□□□ -1.93
RAPGEF3O95398 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.97□□□□□ -1.93
RAPGEF3O95398 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RAPGEF3O95398 SNORD115-30-201ENST00000364117 82 ntBASIC2.97□□□□□ -1.93
RAPGEF3O95398 Y_RNA.418-201ENST00000384029 102 ntBASIC2.97□□□□□ -1.93
RAPGEF3O95398 AC008134.1-201ENST00000420943 193 ntBASIC2.97□□□□□ -1.93
RAPGEF3O95398 MTCO1P44-201ENST00000441935 243 ntBASIC2.97□□□□□ -1.93
RAPGEF3O95398 RNU6-436P-201ENST00000516171 114 ntBASIC2.97□□□□□ -1.93
RAPGEF3O95398 Y_RNA.680-201ENST00000516441 93 ntBASIC2.97□□□□□ -1.93
RAPGEF3O95398 RNU6-794P-201ENST00000517261 64 ntBASIC2.97□□□□□ -1.93
RAPGEF3O95398 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.97□□□□□ -1.93
RAPGEF3O95398 RNU6-1266P-201ENST00000362794 105 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 Y_RNA.361-201ENST00000365515 120 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 Y_RNA.552-201ENST00000384665 112 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 MIR9-3-201ENST00000385084 90 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 MTCO1P5-201ENST00000433573 344 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 AC108059.2-201ENST00000434626 151 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 RNU6-826P-201ENST00000516827 104 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.96□□□□□ -1.94
RAPGEF3O95398 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAPGEF3O95398 AL159152.1-201ENST00000635019 2587 ntBASIC2.96□□□□□ -1.94
RAPGEF3O95398 Y_RNA.44-201ENST00000362676 108 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 Y_RNA.60-201ENST00000362831 98 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 RNU6-324P-201ENST00000363957 106 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 Y_RNA.224-201ENST00000364308 111 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 Y_RNA.477-201ENST00000384352 108 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 SNORD58.1-201ENST00000391313 66 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 AL603910.2-201ENST00000407268 136 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 RNU6-710P-201ENST00000410424 105 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 RNU6-57P-201ENST00000411348 103 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 MRPS10P1-201ENST00000448483 130 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 AC016717.1-201ENST00000448918 286 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 PRELID3BP1-201ENST00000457142 540 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 SNORA4.4-201ENST00000515921 135 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 SNORA70.12-201ENST00000516084 153 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 AC087441.2-201ENST00000529141 262 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 MIR5002-201ENST00000584713 97 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 AC005357.1-201ENST00000588399 301 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 BX248123.2-201ENST00000606318 124 ntBASIC2.95□□□□□ -1.94
RAPGEF3O95398 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RAPGEF3O95398 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
RAPGEF3O95398 UBE2WP1-201ENST00000362030 340 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 Y_RNA.99-201ENST00000363138 105 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 Y_RNA.329-201ENST00000365209 107 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 RNU6-418P-201ENST00000384035 107 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 RNU1-138P-201ENST00000384093 164 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 AL031003.1-201ENST00000404229 172 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 EDDM3CP-201ENST00000415977 425 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 AC010531.2-201ENST00000465012 153 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.94□□□□□ -1.94
RAPGEF3O95398 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.94□□□□□ -1.94
RAPGEF3O95398 SNORA27.4-201ENST00000516650 95 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.94□□□□□ -1.94
RAPGEF3O95398 AL512605.2-201ENST00000592972 256 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.94□□□□□ -1.94
RAPGEF3O95398 AC141273.2-201ENST00000618989 130 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 AC084768.2-201ENST00000622736 221 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 AC006435.5-201ENST00000624486 112 ntBASIC2.94□□□□□ -1.94
RAPGEF3O95398 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
RAPGEF3O95398 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RAPGEF3O95398 RNU6-1318P-201ENST00000365389 103 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 RNU6-1072P-201ENST00000384703 107 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 RNU6-443P-201ENST00000384780 107 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 MIR1276-201ENST00000408707 83 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.93□□□□□ -1.94
RAPGEF3O95398 AC245102.2-201ENST00000448956 180 ntBASIC2.93□□□□□ -1.94
RAPGEF3O95398 AC091959.1-201ENST00000495857 238 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms