Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 RNU1-139P-201ENST00000391307 165 ntBASIC0.48□□□□□ -2.33
SNX4O95219 RNU5A-5P-201ENST00000411054 116 ntBASIC0.48□□□□□ -2.33
SNX4O95219 MTCYBP10-201ENST00000424905 650 ntBASIC0.48□□□□□ -2.33
SNX4O95219 USMG5P1-201ENST00000425964 177 ntBASIC0.48□□□□□ -2.33
SNX4O95219 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.48□□□□□ -2.33
SNX4O95219 RNU6-405P-201ENST00000516637 110 ntBASIC0.48□□□□□ -2.33
SNX4O95219 AP003716.2-201ENST00000528260 108 ntBASIC0.48□□□□□ -2.33
SNX4O95219 MIR5696-201ENST00000578474 85 ntBASIC0.48□□□□□ -2.33
SNX4O95219 AC120024.3-201ENST00000603167 156 ntBASIC0.48□□□□□ -2.33
SNX4O95219 AC019193.3-201ENST00000609144 554 ntBASIC0.48□□□□□ -2.33
SNX4O95219 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.48□□□□□ -2.33
SNX4O95219 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SNX4O95219 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SNX4O95219 RNU6-1085P-201ENST00000363576 107 ntBASIC0.47□□□□□ -2.33
SNX4O95219 RNU4-41P-201ENST00000364426 143 ntBASIC0.47□□□□□ -2.33
SNX4O95219 MIR598-201ENST00000384868 97 ntBASIC0.47□□□□□ -2.33
SNX4O95219 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
SNX4O95219 Z98949.2-201ENST00000440996 144 ntBASIC0.47□□□□□ -2.33
SNX4O95219 RNU6-1132P-201ENST00000459214 107 ntBASIC0.47□□□□□ -2.33
SNX4O95219 HMGN2P26-201ENST00000463169 339 ntBASIC0.47□□□□□ -2.33
SNX4O95219 AC124303.1-201ENST00000605703 360 ntBASIC0.47□□□□□ -2.33
SNX4O95219 AC092954.2-201ENST00000609103 430 ntBASIC0.47□□□□□ -2.33
SNX4O95219 AC073544.1-201ENST00000600110 1595 ntBASIC0.46□□□□□ -2.34
SNX4O95219 RNU6-1237P-201ENST00000384777 107 ntBASIC0.46□□□□□ -2.34
SNX4O95219 AL137792.2-201ENST00000443484 235 ntBASIC0.46□□□□□ -2.34
SNX4O95219 MTND1P11-201ENST00000456661 876 ntBASIC0.46□□□□□ -2.34
SNX4O95219 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.46□□□□□ -2.34
SNX4O95219 RNU6-1114P-201ENST00000516022 107 ntBASIC0.46□□□□□ -2.34
SNX4O95219 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.46□□□□□ -2.34
SNX4O95219 AC121247.2-201ENST00000604776 136 ntBASIC0.46□□□□□ -2.34
SNX4O95219 AC127459.3-201ENST00000624328 466 ntBASIC0.46□□□□□ -2.34
SNX4O95219 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.46□□□□□ -2.34
SNX4O95219 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
SNX4O95219 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.45□□□□□ -2.34
SNX4O95219 MIR936-201ENST00000401264 98 ntBASIC0.45□□□□□ -2.34
SNX4O95219 SNORD111-201ENST00000408139 94 ntBASIC0.45□□□□□ -2.34
SNX4O95219 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
SNX4O95219 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.45□□□□□ -2.34
SNX4O95219 RPS20P10-201ENST00000451209 253 ntBASIC0.45□□□□□ -2.34
SNX4O95219 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.45□□□□□ -2.34
SNX4O95219 SUMO1P2-201ENST00000452524 304 ntBASIC0.45□□□□□ -2.34
SNX4O95219 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.45□□□□□ -2.34
SNX4O95219 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
SNX4O95219 RNU6-1116P-201ENST00000517269 99 ntBASIC0.45□□□□□ -2.34
SNX4O95219 MIR5087-201ENST00000635826 76 ntBASIC0.45□□□□□ -2.34
SNX4O95219 AC068137.3-201ENST00000639191 341 ntBASIC0.45□□□□□ -2.34
SNX4O95219 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
SNX4O95219 Y_RNA.409-201ENST00000383990 98 ntBASIC0.44□□□□□ -2.34
SNX4O95219 RNU6-281P-201ENST00000384212 103 ntBASIC0.44□□□□□ -2.34
SNX4O95219 Y_RNA.490-201ENST00000384413 102 ntBASIC0.44□□□□□ -2.34
SNX4O95219 MIR489-201ENST00000384923 84 ntBASIC0.44□□□□□ -2.34
SNX4O95219 AC243428.1-201ENST00000421099 264 ntBASIC0.44□□□□□ -2.34
SNX4O95219 RNU6-229P-201ENST00000516614 102 ntBASIC0.44□□□□□ -2.34
SNX4O95219 RNU11-2P-201ENST00000516898 142 ntBASIC0.44□□□□□ -2.34
SNX4O95219 RNU6-1096P-201ENST00000517089 102 ntBASIC0.44□□□□□ -2.34
SNX4O95219 ZNF519P2-201ENST00000557032 169 ntBASIC0.44□□□□□ -2.34
SNX4O95219 AL138726.1-201ENST00000614873 333 ntBASIC0.44□□□□□ -2.34
SNX4O95219 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.44□□□□□ -2.34
SNX4O95219 AL008636.1-201ENST00000625038 1018 ntBASIC0.44□□□□□ -2.34
SNX4O95219 RNA5SP48-201ENST00000363969 126 ntBASIC0.43□□□□□ -2.34
SNX4O95219 RNU6-1105P-201ENST00000384774 107 ntBASIC0.43□□□□□ -2.34
SNX4O95219 MIR520C-201ENST00000385005 87 ntBASIC0.43□□□□□ -2.34
SNX4O95219 MIR15B-201ENST00000385045 98 ntBASIC0.43□□□□□ -2.34
SNX4O95219 MIR1185-1-201ENST00000408598 86 ntBASIC0.43□□□□□ -2.34
SNX4O95219 RNU6-994P-201ENST00000410507 111 ntBASIC0.43□□□□□ -2.34
SNX4O95219 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.43□□□□□ -2.34
SNX4O95219 MTATP6P13-201ENST00000438531 667 ntBASIC0.43□□□□□ -2.34
SNX4O95219 RNA5SP436-201ENST00000516020 115 ntBASIC0.43□□□□□ -2.34
SNX4O95219 RNU6-496P-201ENST00000516145 99 ntBASIC0.43□□□□□ -2.34
SNX4O95219 AC090617.3-201ENST00000573670 475 ntBASIC0.43□□□□□ -2.34
SNX4O95219 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
SNX4O95219 AC023510.2-201ENST00000622162 746 ntBASIC0.43□□□□□ -2.34
SNX4O95219 AC243829.3-201ENST00000622177 108 ntBASIC0.43□□□□□ -2.34
SNX4O95219 Y_RNA.373-201ENST00000365600 103 ntBASIC0.42□□□□□ -2.34
SNX4O95219 MIR873-201ENST00000401120 77 ntBASIC0.42□□□□□ -2.34
SNX4O95219 AC244098.3-201ENST00000424803 96 ntBASIC0.42□□□□□ -2.34
SNX4O95219 USP9YP16-201ENST00000430287 407 ntBASIC0.42□□□□□ -2.34
SNX4O95219 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
SNX4O95219 SEPT14P3-201ENST00000439401 183 ntBASIC0.42□□□□□ -2.34
SNX4O95219 AL732372.2-207ENST00000445840 183 ntBASIC0.42□□□□□ -2.34
SNX4O95219 PCNPP5-201ENST00000452246 481 ntBASIC0.42□□□□□ -2.34
SNX4O95219 SEPT14P2-201ENST00000453405 183 ntBASIC0.42□□□□□ -2.34
SNX4O95219 USP9YP23-201ENST00000455085 407 ntBASIC0.42□□□□□ -2.34
SNX4O95219 SEPT14P4-201ENST00000513445 186 ntBASIC0.42□□□□□ -2.34
SNX4O95219 SNORA74.3-201ENST00000517108 154 ntBASIC0.42□□□□□ -2.34
SNX4O95219 FO082796.1-201ENST00000523795 183 ntBASIC0.42□□□□□ -2.34
SNX4O95219 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.42□□□□□ -2.34
SNX4O95219 AC093023.1-201ENST00000547375 507 ntBASIC0.42□□□□□ -2.34
SNX4O95219 AC011195.1-201ENST00000578177 177 ntBASIC0.42□□□□□ -2.34
SNX4O95219 MIR4273-201ENST00000582824 84 ntBASIC0.42□□□□□ -2.34
SNX4O95219 MIR4760-201ENST00000585040 80 ntBASIC0.42□□□□□ -2.34
SNX4O95219 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.41□□□□□ -2.34
SNX4O95219 Y_RNA.405-201ENST00000383979 100 ntBASIC0.41□□□□□ -2.34
SNX4O95219 Y_RNA.451-201ENST00000384200 100 ntBASIC0.41□□□□□ -2.34
SNX4O95219 Y_RNA.524-201ENST00000384564 100 ntBASIC0.41□□□□□ -2.34
SNX4O95219 Y_RNA.561-201ENST00000384694 100 ntBASIC0.41□□□□□ -2.34
SNX4O95219 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.41□□□□□ -2.34
SNX4O95219 AL590632.1-201ENST00000424289 371 ntBASIC0.41□□□□□ -2.34
SNX4O95219 PIGPP3-201ENST00000425307 415 ntBASIC0.41□□□□□ -2.34
SNX4O95219 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms