Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.42□□□□□ -2.18
CSDE1O75534 AC245517.4-201ENST00000448601 281 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 RPS29P23-201ENST00000458635 123 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 AC010469.2-201ENST00000496412 480 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 RNA5SP445-201ENST00000515889 115 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.42□□□□□ -2.18
CSDE1O75534 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.42□□□□□ -2.18
CSDE1O75534 AL160236.1-201ENST00000556317 195 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 AP001094.1-201ENST00000579805 193 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.42□□□□□ -2.18
CSDE1O75534 U6.73-201ENST00000619194 103 ntBASIC1.42□□□□□ -2.18
CSDE1O75534 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CSDE1O75534 RNU6-407P-201ENST00000365280 104 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 MIR1287-201ENST00000408492 90 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.41□□□□□ -2.18
CSDE1O75534 AC236972.2-201ENST00000434979 310 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 MRPS10P1-201ENST00000448483 130 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 AC010598.1-201ENST00000510378 103 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 AC093027.1-201ENST00000546698 429 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 MIR3674-201ENST00000636576 68 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 AC112487.2-201ENST00000637950 304 ntBASIC1.41□□□□□ -2.18
CSDE1O75534 MIR559-201ENST00000385188 96 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 RPL21P1-201ENST00000399532 476 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.4□□□□□ -2.19
CSDE1O75534 SNORD19B-201ENST00000459623 84 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 RPS26P55-201ENST00000471178 356 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 AC093852.1-201ENST00000503587 266 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 FGF7P4-201ENST00000509595 295 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 RNU6-408P-201ENST00000515910 100 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 RNU6-699P-201ENST00000517081 110 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 RNU6-902P-201ENST00000517212 91 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.4□□□□□ -2.19
CSDE1O75534 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.4□□□□□ -2.19
CSDE1O75534 AL121890.5-201ENST00000620848 304 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 AC006435.5-201ENST00000624486 112 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 U6.108-201ENST00000637764 58 ntBASIC1.4□□□□□ -2.19
CSDE1O75534 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 Y_RNA.58-201ENST00000362807 102 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 Y_RNA.146-201ENST00000363549 102 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 Y_RNA.154-201ENST00000363624 102 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 RNY3P1-201ENST00000365085 102 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 RNY3-201ENST00000365484 102 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 Y_RNA.428-201ENST00000384078 102 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 SNORA20B-201ENST00000384220 132 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 RNU6-950P-201ENST00000384651 107 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 RNU6-955P-201ENST00000410497 104 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 AC096644.2-201ENST00000429278 159 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 AC245047.3-201ENST00000429428 127 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.39□□□□□ -2.19
CSDE1O75534 AL606517.2-201ENST00000442855 241 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 RPS26P45-201ENST00000471748 340 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 AC079140.2-201ENST00000506193 142 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 RNU7-99P-201ENST00000516271 62 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 Y_RNA.673-201ENST00000516306 88 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.39□□□□□ -2.19
CSDE1O75534 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.39□□□□□ -2.19
CSDE1O75534 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 MIR3684-201ENST00000579779 74 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 AC073413.2-201ENST00000604332 360 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 U2.1-201ENST00000618978 145 ntBASIC1.39□□□□□ -2.19
CSDE1O75534 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
CSDE1O75534 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.39□□□□□ -2.19
CSDE1O75534 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CSDE1O75534 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 RNU6-1310P-201ENST00000384153 107 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 AL355796.1-201ENST00000406706 323 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 AC010154.1-201ENST00000425857 269 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
CSDE1O75534 FCF1P4-201ENST00000448326 183 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 Y_RNA.661-201ENST00000516003 99 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 RNU7-172P-201ENST00000517125 64 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 RNU7-128P-201ENST00000517247 62 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.38□□□□□ -2.19
CSDE1O75534 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.38□□□□□ -2.19
CSDE1O75534 AP002001.1-203ENST00000534002 267 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.38□□□□□ -2.19
CSDE1O75534 AL442163.3-201ENST00000554110 156 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 AL929325.1-201ENST00000603096 117 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 AC095038.3-201ENST00000634439 195 ntBASIC1.38□□□□□ -2.19
CSDE1O75534 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
CSDE1O75534 Y_RNA.187-201ENST00000363918 113 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 SNORA25.9-201ENST00000365087 128 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 SNORD78.2-201ENST00000391076 69 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 MTND4LP11-201ENST00000422184 280 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 AC018865.2-201ENST00000423631 129 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.37□□□□□ -2.19
CSDE1O75534 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.37□□□□□ -2.19
CSDE1O75534 RNU7-94P-201ENST00000459576 63 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 MTND3P22-201ENST00000510932 243 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 AC097462.1-201ENST00000514125 324 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 SNORD116.3-201ENST00000517176 78 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 AC023442.1-201ENST00000531247 422 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
CSDE1O75534 AC022217.4-201ENST00000604389 163 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms