Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 RNU6-373P-201ENST00000411247 98 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 AC018865.2-201ENST00000423631 129 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 AC104332.1-201ENST00000440471 797 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.68□□□□□ -2.3
CLDN11O75508 RNU7-90P-201ENST00000459216 62 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 RNU7-21P-201ENST00000459430 62 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 RNU6-1278P-201ENST00000516130 107 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 Y_RNA.673-201ENST00000516306 88 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.68□□□□□ -2.3
CLDN11O75508 AC136628.3-201ENST00000521868 290 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 MIR4653-201ENST00000585107 83 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 AL117336.2-201ENST00000602435 335 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 PRELID3BP2-201ENST00000605362 201 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 RMST_2.1-201ENST00000617263 136 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
CLDN11O75508 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
CLDN11O75508 SNORA27.1-201ENST00000362604 124 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 Y_RNA.122-201ENST00000363331 96 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 RPS3AP1-201ENST00000413190 320 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.67□□□□□ -2.3
CLDN11O75508 RPS4XP11-201ENST00000446897 772 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
CLDN11O75508 MTND1P29-201ENST00000448112 647 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.67□□□□□ -2.3
CLDN11O75508 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.67□□□□□ -2.3
CLDN11O75508 MIR4714-201ENST00000580728 77 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 MIR3942-201ENST00000585264 109 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 AC004832.4-201ENST00000608952 331 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 MIR6734-201ENST00000621166 68 ntBASIC0.67□□□□□ -2.3
CLDN11O75508 AC073544.1-201ENST00000600110 1595 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 MIRLET7C-201ENST00000362160 84 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 RNU6-222P-201ENST00000362438 107 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 Y_RNA.106-201ENST00000363189 100 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.66□□□□□ -2.3
CLDN11O75508 UQCRBP2-201ENST00000447827 297 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 AL049830.1-201ENST00000468034 425 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.66□□□□□ -2.3
CLDN11O75508 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.66□□□□□ -2.3
CLDN11O75508 RNU6-1291P-201ENST00000516591 104 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 RNU1-54P-201ENST00000517181 120 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 AC004812.1-201ENST00000540773 146 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 AC024614.3-201ENST00000637860 256 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 CASC19-280ENST00000642102 1351 ntBASIC0.66□□□□□ -2.3
CLDN11O75508 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
CLDN11O75508 MTND5P16-201ENST00000460269 1703 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 SNORD116-13-201ENST00000384408 92 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 MIR329-1-201ENST00000385028 80 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 MIR100-201ENST00000385259 80 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 RNU6-1001P-201ENST00000411265 100 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 ELOCP21-201ENST00000412558 336 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 AL137792.2-201ENST00000443484 235 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 AC245047.8-201ENST00000456455 284 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 RNU6-864P-201ENST00000516256 108 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 RNU6-314P-201ENST00000516574 104 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 AL358944.1-201ENST00000528537 144 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CLDN11O75508 AC127459.3-201ENST00000624328 466 ntBASIC0.65□□□□□ -2.31
CLDN11O75508 RNU6-833P-201ENST00000363486 107 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 Y_RNA.796-201ENST00000364268 102 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 Y_RNA.799-201ENST00000364992 102 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 Y_RNA.355-201ENST00000365462 98 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.64□□□□□ -2.31
CLDN11O75508 RNU6-1013P-201ENST00000384180 107 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 MIR520G-201ENST00000385064 90 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 RNU5A-5P-201ENST00000411054 116 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 EIF1P2-201ENST00000428233 350 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 USP9YP30-201ENST00000430729 455 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 MTND3P21-201ENST00000433774 331 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 Z98949.2-201ENST00000440996 144 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 RPEP5-201ENST00000441137 268 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AC233266.1-201ENST00000454518 96 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AC074133.1-201ENST00000515696 183 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 RNU6-506P-201ENST00000516553 94 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 RNU6-273P-201ENST00000516937 96 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AL096861.1-201ENST00000610899 123 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AC242852.1-201ENST00000612151 96 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AL391903.3-201ENST00000612158 163 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AC022709.1-201ENST00000615967 87 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AC244015.1-201ENST00000622301 99 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 AC090617.10-201ENST00000624308 134 ntBASIC0.64□□□□□ -2.31
CLDN11O75508 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CLDN11O75508 RNU6-1090P-201ENST00000364065 94 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 Y_RNA.269-201ENST00000364685 89 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 RNU6-1145P-201ENST00000384246 107 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 Y_RNA.508-201ENST00000384502 114 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 SNORA75.2-201ENST00000391138 150 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 SNORA75.3-201ENST00000391231 150 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 MIR891A-201ENST00000401237 79 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 AC009161.1-201ENST00000417306 376 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 AL606490.4-201ENST00000423117 127 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 FABP5P4-201ENST00000437203 171 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 MTND4LP16-201ENST00000440828 295 ntBASIC0.63□□□□□ -2.31
CLDN11O75508 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.63□□□□□ -2.31
CLDN11O75508 SNORA70.12-201ENST00000516084 153 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms