Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC083798.1-201ENST00000472671 131 ntBASIC0.3□□□□□ -2.36
KDELR3O43731 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.3□□□□□ -2.36
KDELR3O43731 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
KDELR3O43731 AP003716.2-201ENST00000528260 108 ntBASIC0.3□□□□□ -2.36
KDELR3O43731 SNORA27.1-201ENST00000362604 124 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 RNU6-1322P-201ENST00000364309 107 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 RNU4-41P-201ENST00000364426 143 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 RNU6-1297P-201ENST00000384415 104 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 MIR520C-201ENST00000385005 87 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 RNU4-55P-201ENST00000410731 137 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 AC092989.1-201ENST00000481235 277 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 RPL30P10-201ENST00000488148 337 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 AP001330.5-201ENST00000607176 411 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 RNU6-94P-201ENST00000607728 107 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 AL008636.1-201ENST00000625038 1018 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
KDELR3O43731 AC090625.1-201ENST00000357130 210 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 SNORA25.3-201ENST00000363205 127 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 Y_RNA.151-201ENST00000363566 112 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 SNORD14.1-201ENST00000365609 90 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 RNU6-1264P-201ENST00000383891 107 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 Y_RNA.393-201ENST00000383936 102 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 SNORD105-201ENST00000386910 85 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 MIR1185-1-201ENST00000408598 86 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 RNU5A-5P-201ENST00000411054 116 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 MTCO2P12-201ENST00000427426 682 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.28□□□□□ -2.36
KDELR3O43731 Z98949.2-201ENST00000440996 144 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 MTND3P16-201ENST00000452205 344 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 PCNPP5-201ENST00000452246 481 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 MTND3P7-201ENST00000474435 343 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 RN7SKP298-201ENST00000515950 94 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 RNU11-2P-201ENST00000516898 142 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 RNU6-1116P-201ENST00000517269 99 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.28□□□□□ -2.36
KDELR3O43731 AC087752.4-201ENST00000605911 462 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 AC097520.1-201ENST00000624435 385 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 AC099654.12-201ENST00000639868 649 ntBASIC0.28□□□□□ -2.36
KDELR3O43731 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
KDELR3O43731 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.27□□□□□ -2.37
KDELR3O43731 SNORA69-201ENST00000383895 132 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 Y_RNA.481-201ENST00000384373 102 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 MIR514A2-201ENST00000385131 88 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 MIR514A3-201ENST00000385132 88 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 RNA5SP511-201ENST00000410487 115 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 PIGPP3-201ENST00000425307 415 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 AL137792.2-201ENST00000443484 235 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.27□□□□□ -2.37
KDELR3O43731 AC046134.1-201ENST00000514454 666 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 RNU7-175P-201ENST00000515915 61 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 RNU6-1096P-201ENST00000517089 102 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 SNORA74.3-201ENST00000517108 154 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 AF235103.2-201ENST00000525753 346 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
KDELR3O43731 RN7SL793P-201ENST00000583259 296 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 AC007742.2-201ENST00000618226 398 ntBASIC0.27□□□□□ -2.37
KDELR3O43731 Y_RNA.112-201ENST00000363250 102 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 Y_RNA.167-201ENST00000363735 109 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 MIR1827-201ENST00000408549 66 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 AC243428.1-201ENST00000421099 264 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 AC023442.1-201ENST00000531247 422 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 AC093027.1-201ENST00000546698 429 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 MIR7111-201ENST00000619751 72 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 AC127459.3-201ENST00000624328 466 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 AC010487.4-201ENST00000637027 61 ntBASIC0.26□□□□□ -2.37
KDELR3O43731 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
KDELR3O43731 MTND5P16-201ENST00000460269 1703 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 SNORD68-201ENST00000363214 84 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 Y_RNA.231-201ENST00000364358 102 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 RNY1P8-201ENST00000383970 114 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 MIR517A-201ENST00000385001 87 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 MIR136-201ENST00000385207 82 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 USMG5P1-201ENST00000425964 177 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
KDELR3O43731 SUMO1P2-201ENST00000452524 304 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 SNORA68.3-201ENST00000515906 83 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 RNU6-1114P-201ENST00000516022 107 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 RN7SKP164-201ENST00000516138 266 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 RNU6-415P-201ENST00000516252 97 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 RNU7-43P-201ENST00000516554 64 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.25□□□□□ -2.37
KDELR3O43731 AC036111.3-201ENST00000526389 112 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.25□□□□□ -2.37
KDELR3O43731 MIR4300-201ENST00000581016 96 ntBASIC0.25□□□□□ -2.37
KDELR3O43731 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.25□□□□□ -2.37
KDELR3O43731 RNU6-254P-201ENST00000363377 107 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 SNORD113.3-201ENST00000364630 78 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 MIR873-201ENST00000401120 77 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 MRPS18CP6-201ENST00000423587 223 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.24□□□□□ -2.37
KDELR3O43731 AC114811.1-201ENST00000507207 168 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.24□□□□□ -2.37
KDELR3O43731 RNU7-41P-201ENST00000515917 61 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 Y_RNA.695-201ENST00000516715 107 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 MTATP6P24-201ENST00000576835 677 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 AC024933.1-201ENST00000608472 348 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 AC100810.6-201ENST00000638068 285 ntBASIC0.24□□□□□ -2.37
KDELR3O43731 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms