Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL034345.1-201ENST00000407768 123 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 RNU2-64P-201ENST00000411315 191 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.76□□□□□ -2.29
CHMP2AO43633 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.76□□□□□ -2.29
CHMP2AO43633 NDUFB4P10-201ENST00000452541 359 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.76□□□□□ -2.29
CHMP2AO43633 OR9P1P-201ENST00000496431 281 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 RNU7-175P-201ENST00000515915 61 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 RNU4-49P-201ENST00000516080 140 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 RNU6-63P-201ENST00000516690 95 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 RNU6-566P-201ENST00000516790 107 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 MIR5000-201ENST00000577717 103 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 AL590095.2-201ENST00000604136 117 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 AC005014.2-201ENST00000607795 599 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 AL513423.1-201ENST00000621695 132 ntBASIC0.76□□□□□ -2.29
CHMP2AO43633 ZNF299P-201ENST00000406845 1804 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 Y_RNA.3-201ENST00000362331 103 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 RNU6-280P-201ENST00000364145 104 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 Y_RNA.301-201ENST00000364990 103 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 RNU4-12P-201ENST00000365233 139 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 Y_RNA.402-201ENST00000383972 102 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 RNU6-424P-201ENST00000384367 105 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 MIR608-201ENST00000384820 100 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 MIR329-1-201ENST00000385028 80 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 AC018865.2-201ENST00000423631 129 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 USP9YP16-201ENST00000430287 407 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 AL353997.1-201ENST00000432936 108 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 MTND5P15-201ENST00000434246 349 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 MTND1P17-201ENST00000448961 204 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 USP9YP23-201ENST00000455085 407 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 RNU7-87P-201ENST00000459343 62 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 SNORD79.1-201ENST00000516069 84 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 Y_RNA.683-201ENST00000516508 93 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 RNU7-172P-201ENST00000517125 64 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 APOOP3-201ENST00000536787 586 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 AL121579.1-201ENST00000555129 305 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 AC012557.2-201ENST00000605919 418 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 AC022709.1-201ENST00000615967 87 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.75□□□□□ -2.29
CHMP2AO43633 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 MIRLET7C-201ENST00000362160 84 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 RNU6-454P-201ENST00000364292 107 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 Y_RNA.265-201ENST00000364677 108 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 Y_RNA.295-201ENST00000364918 102 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 Y_RNA.450-201ENST00000384198 113 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 Y_RNA.516-201ENST00000384541 124 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 MIR526A1-201ENST00000384897 85 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 SNORD115-47-201ENST00000391226 86 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 RNU6-1054P-201ENST00000411293 104 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 AC245047.7-201ENST00000440265 293 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.74□□□□□ -2.29
CHMP2AO43633 AC092989.1-201ENST00000481235 277 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 RNA5SP436-201ENST00000516020 115 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 RNU6-1114P-201ENST00000516022 107 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 Y_RNA.682-201ENST00000516457 100 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 RNU6-1198P-201ENST00000516904 67 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 AC136628.3-201ENST00000521868 290 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 AC091178.2-201ENST00000584401 117 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 AL513534.2-201ENST00000603836 250 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 MIR3662-201ENST00000637030 95 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 AC023934.1-201ENST00000574529 2389 ntBASIC0.74□□□□□ -2.29
CHMP2AO43633 RNU6-199P-201ENST00000362954 107 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 RNY4P14-201ENST00000363656 96 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 Y_RNA.318-201ENST00000365131 97 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 RNU6-969P-201ENST00000383900 105 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 Y_RNA.557-201ENST00000384680 107 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 MIR653-201ENST00000385279 96 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 MIR548F1-201ENST00000408667 84 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 RPS3AP1-201ENST00000413190 320 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 EIF1P2-201ENST00000428233 350 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.73□□□□□ -2.29
CHMP2AO43633 RPS29P25-201ENST00000481709 171 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 AC010598.1-201ENST00000510378 103 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.73□□□□□ -2.29
CHMP2AO43633 AC046134.1-201ENST00000514454 666 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 RNA5SP20-201ENST00000515976 84 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 RNU6-120P-201ENST00000516077 103 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 MIR4790-201ENST00000577799 79 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 AC068790.6-201ENST00000602558 258 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 AC080013.6-201ENST00000606185 215 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 GHRLOS.1-201ENST00000610995 70 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 AC015540.1-201ENST00000615828 501 ntBASIC0.73□□□□□ -2.29
CHMP2AO43633 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CHMP2AO43633 RNU1-139P-201ENST00000391307 165 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 RPS26P5-201ENST00000418544 335 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 Z98949.2-201ENST00000440996 144 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 Z83846.1-201ENST00000446798 265 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 PCNPP5-201ENST00000452246 481 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 MTND5P5-201ENST00000503764 376 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.72□□□□□ -2.29
CHMP2AO43633 AC026782.1-201ENST00000512952 449 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 RNU7-12P-201ENST00000516030 62 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 Y_RNA.670-201ENST00000516255 105 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 Y_RNA.706-201ENST00000516933 99 ntBASIC0.72□□□□□ -2.29
CHMP2AO43633 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.72□□□□□ -2.29
CHMP2AO43633 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.72□□□□□ -2.29
CHMP2AO43633 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.72□□□□□ -2.29
CHMP2AO43633 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms