Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.59□□□□□ -2.32
LSM1O15116 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
LSM1O15116 RNY3P3-201ENST00000363816 102 ntBASIC0.58□□□□□ -2.32
LSM1O15116 SNORD116-11-201ENST00000383882 92 ntBASIC0.58□□□□□ -2.32
LSM1O15116 RNU6-483P-201ENST00000384088 108 ntBASIC0.58□□□□□ -2.32
LSM1O15116 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
LSM1O15116 MIR329-1-201ENST00000385028 80 ntBASIC0.58□□□□□ -2.32
LSM1O15116 MTCYBP4-201ENST00000401524 249 ntBASIC0.58□□□□□ -2.32
LSM1O15116 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.58□□□□□ -2.32
LSM1O15116 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.58□□□□□ -2.32
LSM1O15116 RNU6-1281P-201ENST00000516223 105 ntBASIC0.58□□□□□ -2.32
LSM1O15116 RNU6-1116P-201ENST00000517269 99 ntBASIC0.58□□□□□ -2.32
LSM1O15116 MTND4LP26-201ENST00000518144 282 ntBASIC0.58□□□□□ -2.32
LSM1O15116 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
LSM1O15116 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
LSM1O15116 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
LSM1O15116 MIR3611-201ENST00000584484 83 ntBASIC0.58□□□□□ -2.32
LSM1O15116 MIR8070-201ENST00000616510 88 ntBASIC0.58□□□□□ -2.32
LSM1O15116 ZNF299P-201ENST00000406845 1804 ntBASIC0.58□□□□□ -2.32
LSM1O15116 Y_RNA.4-201ENST00000362333 112 ntBASIC0.57□□□□□ -2.32
LSM1O15116 SNORD18A-201ENST00000363753 72 ntBASIC0.57□□□□□ -2.32
LSM1O15116 Y_RNA.414-201ENST00000384011 101 ntBASIC0.57□□□□□ -2.32
LSM1O15116 MIR520E-201ENST00000384867 87 ntBASIC0.57□□□□□ -2.32
LSM1O15116 MIR520G-201ENST00000385064 90 ntBASIC0.57□□□□□ -2.32
LSM1O15116 MIR891A-201ENST00000401237 79 ntBASIC0.57□□□□□ -2.32
LSM1O15116 AC010486.3-201ENST00000511602 785 ntBASIC0.57□□□□□ -2.32
LSM1O15116 RNU6-107P-201ENST00000516643 102 ntBASIC0.57□□□□□ -2.32
LSM1O15116 AP003484.1-201ENST00000530974 250 ntBASIC0.57□□□□□ -2.32
LSM1O15116 AC093023.1-201ENST00000547375 507 ntBASIC0.57□□□□□ -2.32
LSM1O15116 AC131055.1-201ENST00000584626 316 ntBASIC0.57□□□□□ -2.32
LSM1O15116 AC012557.2-201ENST00000605919 418 ntBASIC0.57□□□□□ -2.32
LSM1O15116 RNU6-222P-201ENST00000362438 107 ntBASIC0.56□□□□□ -2.32
LSM1O15116 SNORD114-22-201ENST00000365423 72 ntBASIC0.56□□□□□ -2.32
LSM1O15116 RNU6-376P-201ENST00000384731 106 ntBASIC0.56□□□□□ -2.32
LSM1O15116 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
LSM1O15116 EIF1P2-201ENST00000428233 350 ntBASIC0.56□□□□□ -2.32
LSM1O15116 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.56□□□□□ -2.32
LSM1O15116 U7.7-201ENST00000459276 60 ntBASIC0.56□□□□□ -2.32
LSM1O15116 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM1O15116 CYCTP-201ENST00000504253 315 ntBASIC0.56□□□□□ -2.32
LSM1O15116 RNU6-1278P-201ENST00000516130 107 ntBASIC0.56□□□□□ -2.32
LSM1O15116 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.56□□□□□ -2.32
LSM1O15116 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.56□□□□□ -2.32
LSM1O15116 MIR4452-201ENST00000583004 71 ntBASIC0.56□□□□□ -2.32
LSM1O15116 NBR2-204ENST00000587322 63 ntBASIC0.56□□□□□ -2.32
LSM1O15116 AL357075.2-201ENST00000614906 189 ntBASIC0.56□□□□□ -2.32
LSM1O15116 SEPT14P17-201ENST00000617978 177 ntBASIC0.56□□□□□ -2.32
LSM1O15116 U6.115-201ENST00000636045 103 ntBASIC0.56□□□□□ -2.32
LSM1O15116 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
LSM1O15116 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
LSM1O15116 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.55□□□□□ -2.32
LSM1O15116 RNU6-407P-201ENST00000365280 104 ntBASIC0.55□□□□□ -2.32
LSM1O15116 RNU6-1042P-201ENST00000384204 107 ntBASIC0.55□□□□□ -2.32
LSM1O15116 RNU6-1145P-201ENST00000384246 107 ntBASIC0.55□□□□□ -2.32
LSM1O15116 RNU6-163P-201ENST00000384396 106 ntBASIC0.55□□□□□ -2.32
LSM1O15116 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
LSM1O15116 MIR1185-1-201ENST00000408598 86 ntBASIC0.55□□□□□ -2.32
LSM1O15116 RNU6-1001P-201ENST00000411265 100 ntBASIC0.55□□□□□ -2.32
LSM1O15116 USMG5P1-201ENST00000425964 177 ntBASIC0.55□□□□□ -2.32
LSM1O15116 USP9YP16-201ENST00000430287 407 ntBASIC0.55□□□□□ -2.32
LSM1O15116 AC093019.1-201ENST00000443135 252 ntBASIC0.55□□□□□ -2.32
LSM1O15116 USP9YP23-201ENST00000455085 407 ntBASIC0.55□□□□□ -2.32
LSM1O15116 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
LSM1O15116 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
LSM1O15116 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.55□□□□□ -2.32
LSM1O15116 AC120024.3-201ENST00000603167 156 ntBASIC0.55□□□□□ -2.32
LSM1O15116 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.55□□□□□ -2.32
LSM1O15116 SNORD114-7-201ENST00000362520 77 ntBASIC0.54□□□□□ -2.32
LSM1O15116 Y_RNA.361-201ENST00000365515 120 ntBASIC0.54□□□□□ -2.32
LSM1O15116 MIR873-201ENST00000401120 77 ntBASIC0.54□□□□□ -2.32
LSM1O15116 AL162725.1-201ENST00000435405 301 ntBASIC0.54□□□□□ -2.32
LSM1O15116 MTND1P26-201ENST00000440488 538 ntBASIC0.54□□□□□ -2.32
LSM1O15116 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.54□□□□□ -2.32
LSM1O15116 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.54□□□□□ -2.32
LSM1O15116 Y_RNA.704-201ENST00000516851 102 ntBASIC0.54□□□□□ -2.32
LSM1O15116 AC109810.1-201ENST00000534066 224 ntBASIC0.54□□□□□ -2.32
LSM1O15116 AC090617.3-201ENST00000573670 475 ntBASIC0.54□□□□□ -2.32
LSM1O15116 MIR5701-3-201ENST00000578890 82 ntBASIC0.54□□□□□ -2.32
LSM1O15116 MIR5701-1-201ENST00000585138 82 ntBASIC0.54□□□□□ -2.32
LSM1O15116 AC093913.1-201ENST00000614178 329 ntBASIC0.54□□□□□ -2.32
LSM1O15116 MIR5701-2-201ENST00000615634 82 ntBASIC0.54□□□□□ -2.32
LSM1O15116 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.54□□□□□ -2.32
LSM1O15116 AP000770.2-201ENST00000623694 100 ntBASIC0.54□□□□□ -2.32
LSM1O15116 AC073544.1-201ENST00000600110 1595 ntBASIC0.53□□□□□ -2.32
LSM1O15116 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
LSM1O15116 Y_RNA.106-201ENST00000363189 100 ntBASIC0.53□□□□□ -2.32
LSM1O15116 U8.5-201ENST00000364528 136 ntBASIC0.53□□□□□ -2.32
LSM1O15116 RNU6-306P-201ENST00000384617 107 ntBASIC0.53□□□□□ -2.32
LSM1O15116 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
LSM1O15116 RNU6-332P-201ENST00000391193 108 ntBASIC0.53□□□□□ -2.32
LSM1O15116 MTCYBP10-201ENST00000424905 650 ntBASIC0.53□□□□□ -2.32
LSM1O15116 RPL23AP50-201ENST00000434149 455 ntBASIC0.53□□□□□ -2.32
LSM1O15116 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
LSM1O15116 AC074133.1-201ENST00000515696 183 ntBASIC0.53□□□□□ -2.32
LSM1O15116 RN7SKP164-201ENST00000516138 266 ntBASIC0.53□□□□□ -2.32
LSM1O15116 RNU6-1096P-201ENST00000517089 102 ntBASIC0.53□□□□□ -2.32
LSM1O15116 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.53□□□□□ -2.32
LSM1O15116 MIR4762-201ENST00000585261 75 ntBASIC0.53□□□□□ -2.32
LSM1O15116 MIR3942-201ENST00000585264 109 ntBASIC0.53□□□□□ -2.32
LSM1O15116 AC100812.1-201ENST00000607622 580 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms