Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC106754.1-201ENST00000562632 1513 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 MTND5P18-201ENST00000445624 1801 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CACNA1AO00555 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNU6-960P-201ENST00000364056 120 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNA5SP117-201ENST00000365294 118 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNU6-376P-201ENST00000384731 106 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 MIR15B-201ENST00000385045 98 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 SNORA75.1-201ENST00000391130 148 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNA5SP482-201ENST00000391269 118 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.27□□□□□ -2.45
CACNA1AO00555 AL158050.1-201ENST00000416077 457 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC090844.1-201ENST00000422019 156 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC010975.2-201ENST00000427781 588 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNU7-41P-201ENST00000515917 61 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNU2-10P-201ENST00000516375 211 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNU7-128P-201ENST00000517247 62 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC107934.1-201ENST00000522215 217 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC013828.2-201ENST00000532487 235 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.27□□□□□ -2.45
CACNA1AO00555 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.27□□□□□ -2.45
CACNA1AO00555 MIR548AD-201ENST00000584780 82 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC005176.2-201ENST00000596933 147 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNU6-88P-201ENST00000606801 100 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AF250324.2-201ENST00000608299 610 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 AC010999.1-201ENST00000611856 324 ntBASIC-0.27□□□□□ -2.45
CACNA1AO00555 RNU6-975P-201ENST00000384296 105 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU2-54P-201ENST00000410299 190 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.28□□□□□ -2.45
CACNA1AO00555 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC069271.1-201ENST00000445577 156 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU6-221P-201ENST00000459541 99 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC046134.1-201ENST00000514454 666 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU7-28P-201ENST00000516759 62 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC068587.4-201ENST00000533893 186 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC027279.3-201ENST00000625055 122 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 snoZ196.1-201ENST00000625269 89 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 MTND4P9-201ENST00000507819 1346 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 MIRLET7C-201ENST00000362160 84 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 MIR586-201ENST00000385035 97 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 MTCYBP4-201ENST00000401524 249 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU6-284P-201ENST00000411105 106 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AL663109.1-201ENST00000411498 844 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 MTCO1P17-201ENST00000411522 491 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 ELOCP17-201ENST00000414751 326 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AL390729.2-201ENST00000416137 156 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 MLLT10P1-201ENST00000418346 262 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 PIGPP3-201ENST00000425307 415 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC079781.2-201ENST00000446424 169 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC091021.1-201ENST00000468051 388 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.28□□□□□ -2.45
CACNA1AO00555 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC120024.3-201ENST00000603167 156 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 AC112204.3-201ENST00000623822 332 ntBASIC-0.28□□□□□ -2.45
CACNA1AO00555 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU6-47P-201ENST00000383866 107 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU6-125P-201ENST00000384505 107 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU6-535P-201ENST00000384722 107 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU6-387P-201ENST00000411331 105 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RPL21P38-201ENST00000418090 167 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC-0.29□□□□□ -2.46
CACNA1AO00555 SEPT14P24-201ENST00000447236 180 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.29□□□□□ -2.46
CACNA1AO00555 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC108729.2-201ENST00000476543 840 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU2-56P-201ENST00000516826 190 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC133485.4-201ENST00000561835 220 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC090517.1-201ENST00000569307 266 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 MIR5706-201ENST00000579841 80 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 MIR4438-201ENST00000585271 93 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 MTATP6P2-201ENST00000603319 678 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AP000753.3-201ENST00000604083 169 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC072039.2-201ENST00000608883 439 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC068792.1-201ENST00000621354 417 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC010608.3-201ENST00000625048 527 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AL162726.3-218ENST00000636401 95 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 SNORD115-2-201ENST00000362842 82 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 SNORD14.1-201ENST00000365609 90 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 MIR562-201ENST00000384894 95 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 MIR516B2-201ENST00000385190 85 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU6-504P-201ENST00000516568 104 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC010376.1-201ENST00000522101 334 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 MTND2P38-201ENST00000522536 667 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.29□□□□□ -2.46
CACNA1AO00555 AL136221.1-201ENST00000621449 509 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 AC139792.3-201ENST00000623525 224 ntBASIC-0.29□□□□□ -2.46
CACNA1AO00555 RNU6-1084P-201ENST00000362498 107 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms