Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AL137100.2-201ENST00000555786 315 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AC055872.1-201ENST00000570978 278 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 C8orf59P2-201ENST00000603441 271 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AC022217.4-201ENST00000604389 163 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AC005828.6-201ENST00000606610 232 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AL359075.3-201ENST00000613288 217 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 MIR8074-201ENST00000615081 81 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 U2.1-201ENST00000618978 145 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AC006435.5-201ENST00000624486 112 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 AC095038.3-201ENST00000634439 195 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 U6.115-201ENST00000636045 103 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 MIR3674-201ENST00000636576 68 ntBASIC1.43□□□□□ -2.18
NEDD8-MDP1E9PL57 MIR424-201ENST00000362227 98 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 Y_RNA.252-201ENST00000364556 101 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 Y_RNA.509-201ENST00000384506 99 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 RNU2-7P-201ENST00000410794 178 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AC018865.2-201ENST00000423631 129 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 RNU1-98P-201ENST00000458992 160 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AC010469.2-201ENST00000496412 480 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AC025465.3-201ENST00000510570 311 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 RNU7-99P-201ENST00000516271 62 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 SNORD116.3-201ENST00000517176 78 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AC023157.2-201ENST00000540596 141 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AL133255.1-201ENST00000606374 441 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AL008636.1-201ENST00000625038 1018 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 MIR4272-201ENST00000635924 64 ntBASIC1.42□□□□□ -2.18
NEDD8-MDP1E9PL57 Y_RNA.243-201ENST00000364481 109 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 RNU6-867P-201ENST00000364956 107 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 RNU6-926P-201ENST00000384075 107 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 Y_RNA.428-201ENST00000384078 102 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 MIR194-1-201ENST00000384892 85 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 RNA5SP323-201ENST00000391094 133 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 RPL21P1-201ENST00000399532 476 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 RNU6-1186P-201ENST00000410429 97 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 RNA5SP475-201ENST00000410568 110 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 JTBP1-201ENST00000441314 247 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 MRPS10P1-201ENST00000448483 130 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 AC112492.4-201ENST00000456549 352 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 AC005908.1-201ENST00000468701 347 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 SNORA31.10-201ENST00000516482 106 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 RNU4-77P-201ENST00000516692 156 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 AC027419.1-201ENST00000522976 328 ntBASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.41□□□□□ -2.18
NEDD8-MDP1E9PL57 Y_RNA.197-201ENST00000364004 102 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORA25.9-201ENST00000365087 128 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-203P-201ENST00000384038 104 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 FCF1P4-201ENST00000448326 183 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 snoU13.27-201ENST00000459278 104 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 RPL36AP21-201ENST00000490372 323 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 HMGN1P13-201ENST00000505795 138 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU2-12P-201ENST00000517216 168 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR3198-2-201ENST00000577868 80 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR3684-201ENST00000579779 74 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR4438-201ENST00000585271 93 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 VN1R91P-201ENST00000594377 169 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 AL080274.1-201ENST00000605565 220 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 AC004467.1-201ENST00000615678 330 ntBASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NEDD8-MDP1E9PL57 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR126-201ENST00000362291 85 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.27-201ENST00000362540 103 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORA27.1-201ENST00000362604 124 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU1-22P-201ENST00000363334 158 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-392P-201ENST00000364926 101 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.361-201ENST00000365515 120 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-1310P-201ENST00000384153 107 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 MRPL35P1-201ENST00000404272 572 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 RPS27P22-201ENST00000478056 241 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-976P-201ENST00000516086 111 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 SNORA44.1-201ENST00000517031 108 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR4659A-201ENST00000580269 81 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR5188-201ENST00000583467 113 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 AC092447.9-201ENST00000603395 144 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR8070-201ENST00000616510 88 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 U6.92-201ENST00000636464 89 ntBASIC1.39□□□□□ -2.19
NEDD8-MDP1E9PL57 MIR302D-201ENST00000362275 68 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 Y_RNA.101-201ENST00000363154 102 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU6-414P-201ENST00000363705 104 ntBASIC1.38□□□□□ -2.19
NEDD8-MDP1E9PL57 RNU5E-4P-201ENST00000364931 120 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms