Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SNORA40.9-201ENST00000515895 93 ntBASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 AP002001.1-203ENST00000534002 267 ntBASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 RAB11AP2-201ENST00000545905 639 ntBASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 AL365434.2-201ENST00000607979 234 ntBASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 AC087588.2-201ENST00000617667 426 ntBASIC1.25□□□□□ -2.21
NPIPA2E9PIF3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 RNU6-1301P-201ENST00000362724 104 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 SNORA25.9-201ENST00000365087 128 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 Y_RNA.474-201ENST00000384341 102 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 SNORA75.6-201ENST00000391318 127 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 MTCYBP4-201ENST00000401524 249 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 SNX2P2-201ENST00000424553 323 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 RNA5SP20-201ENST00000515976 84 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 RNU7-172P-201ENST00000517125 64 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 AC113139.1-201ENST00000605049 239 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 AC040896.1-201ENST00000613819 479 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 MIR7974-201ENST00000615835 79 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 AC091895.1-201ENST00000624494 256 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 MTND4LP32-201ENST00000636111 270 ntBASIC1.24□□□□□ -2.21
NPIPA2E9PIF3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 AC018630.2-201ENST00000534866 2403 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 RNU6-454P-201ENST00000364292 107 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 RNU6-392P-201ENST00000364926 101 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 RNU6-1283P-201ENST00000365314 105 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 RNU6-926P-201ENST00000384075 107 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 Y_RNA.577-201ENST00000384794 101 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 MIR625-201ENST00000385047 85 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 SNORA69.1-201ENST00000390904 137 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 RAB28P5-201ENST00000427490 651 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 AC097462.1-201ENST00000514125 324 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 RNU6-408P-201ENST00000515910 100 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 AC005730.3-201ENST00000583067 366 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 AL390123.1-201ENST00000603216 237 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 AC006435.5-201ENST00000624486 112 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 U6.115-201ENST00000636045 103 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 MIR3674-201ENST00000636576 68 ntBASIC1.23□□□□□ -2.21
NPIPA2E9PIF3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 RNU1-22P-201ENST00000363334 158 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 Y_RNA.142-201ENST00000363491 102 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 AC018865.2-201ENST00000423631 129 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 MTND4P28-201ENST00000426217 387 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 Y_RNA.653-201ENST00000459091 95 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 RNU6-470P-201ENST00000515954 104 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 Y_RNA.673-201ENST00000516306 88 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 MIR6079-201ENST00000635807 62 ntBASIC1.22□□□□□ -2.21
NPIPA2E9PIF3 SNORA27.1-201ENST00000362604 124 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 RNU6-136P-201ENST00000384663 107 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 MIR499A-201ENST00000384903 122 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 SNORA12.1-201ENST00000390873 148 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 Y_RNA.592-201ENST00000410274 109 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 MTCO3P19-201ENST00000415864 321 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 MRPS18CP6-201ENST00000423587 223 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 STAG3L5P-204ENST00000443759 179 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 PGBD4P5-201ENST00000445958 426 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 RNU7-94P-201ENST00000459576 63 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 AC091021.1-201ENST00000468051 388 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 HMGN1P7-201ENST00000491722 313 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 RPL21P9-201ENST00000556149 474 ntBASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
NPIPA2E9PIF3 RNU6-961P-201ENST00000363893 105 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 Y_RNA.314-201ENST00000365114 102 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 AL034345.1-201ENST00000407768 123 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 Y_RNA.605-201ENST00000410577 105 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 MIR2355-201ENST00000517199 87 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 CYP3A52P-201ENST00000563326 91 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 AC080078.3-201ENST00000605407 463 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 AC106754.2-201ENST00000623006 233 ntBASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
NPIPA2E9PIF3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 SNORA72.1-201ENST00000363485 129 ntBASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 Y_RNA.259-201ENST00000364619 101 ntBASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 RNU6-1297P-201ENST00000384415 104 ntBASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 RNU6-376P-201ENST00000384731 106 ntBASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 MIR758-201ENST00000390227 88 ntBASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.19□□□□□ -2.22
NPIPA2E9PIF3 AC096644.2-201ENST00000429278 159 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms