Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 MIR4742-201ENST00000581069 85 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 GHRLOS.1-201ENST00000610995 70 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SEPT14P17-201ENST00000617978 177 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 MIR302D-201ENST00000362275 68 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.89-201ENST00000363031 102 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SNORD68-201ENST00000363214 84 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-99P-201ENST00000364721 107 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-281P-201ENST00000384212 103 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SNORA25-201ENST00000384384 134 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNA5SP219-201ENST00000390940 113 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SNORA75.4-201ENST00000391278 119 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 UBE2V1P7-201ENST00000446395 340 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 LINC01399-202ENST00000458450 244 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 HMGN2P26-201ENST00000463169 339 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 HMGN1P10-201ENST00000474557 553 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RPL30P7-201ENST00000479312 323 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.665-201ENST00000516177 98 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1041P-201ENST00000516254 102 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 Y_RNA.683-201ENST00000516508 93 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-506P-201ENST00000516553 94 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1291P-201ENST00000516591 104 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-1314P-201ENST00000517139 104 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 RNU6-902P-201ENST00000517212 91 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC022868.1-201ENST00000517767 391 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC004584.2-201ENST00000570407 410 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC091178.2-201ENST00000584401 117 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC022441.3-201ENST00000605737 136 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AL138726.1-201ENST00000614873 333 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC063943.3-201ENST00000615562 356 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 AC090617.10-201ENST00000624308 134 ntBASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.47□□□□□ -2.33
COL6A6A6NMZ7 MIR410-201ENST00000362222 80 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-845P-201ENST00000362578 103 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 SNORD115-32-201ENST00000364079 82 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.265-201ENST00000364677 108 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-593P-201ENST00000364716 112 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-596P-201ENST00000365395 98 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-831P-201ENST00000384548 107 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 MIR1185-2-201ENST00000408687 86 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-908P-201ENST00000410160 94 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNA5SP118-201ENST00000410385 109 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 EIF1P1-201ENST00000421436 341 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AC018865.2-201ENST00000423631 129 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AL606517.2-201ENST00000442855 241 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU7-34P-201ENST00000459394 64 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AC093303.1-201ENST00000514549 295 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1114P-201ENST00000516022 107 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.693-201ENST00000516641 110 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1016P-201ENST00000516689 94 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 RNU6-1088P-201ENST00000516850 104 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AC018448.1-201ENST00000552843 316 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AC026470.2-201ENST00000561492 181 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 SNORA77B-201ENST00000578179 125 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 MIR6718-201ENST00000616153 80 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 AC048344.4-201ENST00000619744 527 ntBASIC0.46□□□□□ -2.34
COL6A6A6NMZ7 MIRLET7C-201ENST00000362160 84 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.99-201ENST00000363138 105 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU6-873P-201ENST00000363833 107 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 SNORD115-30-201ENST00000364117 82 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU6-280P-201ENST00000364145 104 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 MIR608-201ENST00000384820 100 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AC245047.7-201ENST00000440265 293 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 DYNLT3P2-201ENST00000442517 295 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AC026782.1-201ENST00000512952 449 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU1-54P-201ENST00000517181 120 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AC080013.6-201ENST00000606185 215 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 AL121757.2-201ENST00000611223 313 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 U4.5-201ENST00000617137 123 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU6-451P-201ENST00000362921 107 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU4-12P-201ENST00000365233 139 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU4-20P-201ENST00000365601 151 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.409-201ENST00000383990 98 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.436-201ENST00000384097 102 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.516-201ENST00000384541 124 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 RNU6-296P-201ENST00000384608 107 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 Y_RNA.573-201ENST00000384763 105 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 MIR487A-201ENST00000385009 80 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 MIR153-2-201ENST00000385225 87 ntBASIC0.45□□□□□ -2.34
COL6A6A6NMZ7 SNORA48.1-201ENST00000390879 135 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms