Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 Y_RNA.310-201ENST00000365063 113 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 RNU6-1289P-201ENST00000384431 106 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 SNORA40.19-201ENST00000390846 128 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 RNU2-14P-201ENST00000411053 191 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 HMGN2P34-201ENST00000437647 269 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 COX6CP14-201ENST00000469580 174 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 RNA5SP20-201ENST00000515976 84 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 MIR3169-201ENST00000578032 83 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 ZNF861P-201ENST00000588126 639 ntBASIC2.93□□□□□ -1.94
CCDC85CA6NKD9 Y_RNA.76-201ENST00000362931 109 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 RNA5SP493-201ENST00000364115 91 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 RNU6-117P-201ENST00000365415 107 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 AL139156.1-201ENST00000412785 841 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 RPS12P2-201ENST00000439728 269 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 AL139109.1-201ENST00000455491 297 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 RNA5SP281-201ENST00000516504 135 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 AC011921.3-201ENST00000605540 361 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 AC090425.1-201ENST00000610007 140 ntBASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CCDC85CA6NKD9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 RNU6-801P-201ENST00000364087 105 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 RNU1-96P-201ENST00000364163 162 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 RNU6-662P-201ENST00000384253 104 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 Y_RNA.515-201ENST00000384535 112 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 AL117342.1-201ENST00000404861 406 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 AL137100.2-201ENST00000555786 315 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 U6.73-201ENST00000619194 103 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 MIR338-201ENST00000636369 67 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 WWP1P1-201ENST00000466609 2769 ntBASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC85CA6NKD9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
CCDC85CA6NKD9 RNU1-58P-201ENST00000362413 163 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 RNY1P10-201ENST00000363268 113 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.117-201ENST00000363294 101 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 RNU1-22P-201ENST00000363334 158 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.540-201ENST00000384638 111 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 RNU6-855P-201ENST00000410395 104 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 ATP5J2P3-201ENST00000451550 258 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.637-201ENST00000459424 114 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 AC010401.1-201ENST00000463867 348 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 AC097462.1-201ENST00000514125 324 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 RNU6-1337P-201ENST00000516525 95 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 RNA5SP380-201ENST00000517190 98 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 SNORA4-201ENST00000584302 138 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 AL031274.2-201ENST00000599419 203 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 AL442067.1-201ENST00000613261 223 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 AC022202.1-201ENST00000613515 211 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CCDC85CA6NKD9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.341-201ENST00000365341 102 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 SNORA72.4-201ENST00000384174 132 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 MIR518C-201ENST00000384822 101 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 MIR1253-201ENST00000408273 105 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.590-201ENST00000410140 107 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 AC005840.1-201ENST00000498412 377 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 TRMT112P2-201ENST00000512910 132 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 RNA5SP282-201ENST00000516355 108 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 MIR4438-201ENST00000585271 93 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 AC073349.3-201ENST00000617616 186 ntBASIC2.89□□□□□ -1.95
CCDC85CA6NKD9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 MIR378A-201ENST00000362177 66 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.65-201ENST00000362846 100 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RNU6-407P-201ENST00000365280 104 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RNY4P28-201ENST00000365281 93 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RNU6-805P-201ENST00000365643 106 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RNU1-52P-201ENST00000384190 164 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 MIR515-2-201ENST00000384883 83 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 MIR515-1-201ENST00000384884 83 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 MIR613-201ENST00000385248 95 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 SNORA26.9-201ENST00000391322 122 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RNU6-651P-201ENST00000411040 105 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 CST2P1-201ENST00000425770 87 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RPS20P10-201ENST00000451209 253 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 HMGN1P18-201ENST00000457642 277 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RN7SL442P-201ENST00000473804 320 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 AC234781.5-201ENST00000508429 271 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 Y_RNA.700-201ENST00000516806 100 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 MIR3668-201ENST00000582138 75 ntBASIC2.88□□□□□ -1.95
CCDC85CA6NKD9 AL008718.3-201ENST00000610217 321 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms