Protein–RNA interactions for Protein: A6NCK2

TRIM43B, Tripartite motif-containing protein 43B, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43BA6NCK2 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 AL031003.1-201ENST00000404229 172 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 RNU6-1203P-201ENST00000410703 110 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 RNU6-1199P-201ENST00000411249 104 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 AC016909.1-201ENST00000415916 166 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 SNORD65B-201ENST00000459126 73 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 AC079804.2-201ENST00000490376 200 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 AC010598.1-201ENST00000510378 103 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 SNORA70.12-201ENST00000516084 153 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 SUMO2P18-201ENST00000518873 252 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 MIR3149-201ENST00000584629 83 ntBASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM43BA6NCK2 RNU6-702P-201ENST00000364982 107 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.383-201ENST00000383855 97 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.396-201ENST00000383949 103 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.452-201ENST00000384202 108 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.541-201ENST00000384640 113 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.569-201ENST00000384749 103 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 SNORA17.3-201ENST00000391159 129 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC060773.1-201ENST00000421698 310 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC024067.1-201ENST00000426199 223 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 HMGN2P34-201ENST00000437647 269 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AL353689.1-201ENST00000438895 199 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC011406.1-201ENST00000512440 370 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 RNA5SP200-201ENST00000516360 103 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 RNU6-966P-201ENST00000516479 104 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC027419.1-201ENST00000522976 328 ntBASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM43BA6NCK2 SNORA3A-201ENST00000364113 130 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 RNU6-514P-201ENST00000384208 107 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 SNORA20B-201ENST00000384220 132 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 RNU6-574P-201ENST00000384265 107 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.483-201ENST00000384380 101 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 MTND4LP30-201ENST00000454092 297 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 AC004817.2-201ENST00000561794 651 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 AC005828.6-201ENST00000606610 232 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 AC127459.3-201ENST00000624328 466 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 AC006435.5-201ENST00000624486 112 ntBASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
TRIM43BA6NCK2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 MT-TW-201ENST00000387382 68 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 HMGN2P39-201ENST00000398005 273 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 MIR873-201ENST00000401120 77 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 BX510359.4-201ENST00000423750 193 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 RNU6-436P-201ENST00000516171 114 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 RNU2-31P-201ENST00000516954 155 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 AP005660.1-201ENST00000522972 293 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 DEFB108E-201ENST00000524692 240 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 MIR3169-201ENST00000578032 83 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 AC078899.2-201ENST00000595282 212 ntBASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM43BA6NCK2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 SNORA25.1-201ENST00000362326 128 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.193-201ENST00000363979 102 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 RNU6-407P-201ENST00000365280 104 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 RNU6-472P-201ENST00000384299 107 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 RNU11-3P-201ENST00000391111 133 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 AL355796.1-201ENST00000406706 323 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 MRPS10P1-201ENST00000448483 130 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 RPS27P22-201ENST00000478056 241 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 RNU6-1338P-201ENST00000516328 91 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 AL137100.2-201ENST00000555786 315 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 DEFB117-201ENST00000602356 141 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
TRIM43BA6NCK2 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 AC010615.1-201ENST00000594254 1764 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 AL391987.6-201ENST00000305671 199 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 Y_RNA.16-201ENST00000362421 102 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 SNORD114-7-201ENST00000362520 77 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 SNORA27.1-201ENST00000362604 124 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 RNU6-326P-201ENST00000365480 107 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 RNU6-1248P-201ENST00000391096 64 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 RNA5SP465-201ENST00000391195 109 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 RNU6-710P-201ENST00000410424 105 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 AC010154.1-201ENST00000425857 269 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 AP000942.4-201ENST00000604811 241 ntBASIC2.34□□□□□ -2.03
TRIM43BA6NCK2 AL353149.1-201ENST00000610667 244 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms