Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 MIR1277-201ENST00000408536 78 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 RNU5A-5P-201ENST00000411054 116 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 UBE2V1P7-201ENST00000446395 340 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 U8.22-201ENST00000459141 133 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.09□□□□□ -2.23
SYCE3A1L190 RNU2-56P-201ENST00000516826 190 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 AP002004.2-201ENST00000531656 154 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 AP002001.1-203ENST00000534002 267 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.09□□□□□ -2.23
SYCE3A1L190 AC002553.4-201ENST00000616896 331 ntBASIC1.09□□□□□ -2.23
SYCE3A1L190 AC005592.1-201ENST00000566527 1640 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 MIRLET7C-201ENST00000362160 84 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 Y_RNA.2-201ENST00000362330 96 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 Y_RNA.86-201ENST00000363020 111 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 RNU6-454P-201ENST00000364292 107 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 Y_RNA.267-201ENST00000364679 109 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 Y_RNA.339-201ENST00000365325 102 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 RNU6-117P-201ENST00000365415 107 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 MTND3P8-201ENST00000412909 339 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 AC245047.7-201ENST00000440265 293 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 RNU7-87P-201ENST00000459343 62 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 AC022493.2-201ENST00000506122 481 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 AC011352.1-201ENST00000512300 793 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.08□□□□□ -2.24
SYCE3A1L190 AF235103.2-201ENST00000525753 346 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 AC080078.2-201ENST00000603766 501 ntBASIC1.08□□□□□ -2.24
SYCE3A1L190 Y_RNA.4-201ENST00000362333 112 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 RNU6-879P-201ENST00000364328 108 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 RNU6-1187P-201ENST00000364771 110 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.07□□□□□ -2.24
SYCE3A1L190 RNU6-318P-201ENST00000384283 103 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 Y_RNA.498-201ENST00000384460 102 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 RNU6-910P-201ENST00000390844 107 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 RNA5SP482-201ENST00000391269 118 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 AL451046.2-201ENST00000403074 277 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 MIR548F5-201ENST00000408421 86 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.07□□□□□ -2.24
SYCE3A1L190 RPS3AP52-201ENST00000435639 297 ntBASIC1.07□□□□□ -2.24
SYCE3A1L190 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.07□□□□□ -2.24
SYCE3A1L190 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.06□□□□□ -2.24
SYCE3A1L190 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SYCE3A1L190 RNU6-376P-201ENST00000384731 106 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 MIR222-201ENST00000384992 110 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 SNORD12-201ENST00000391002 90 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 MIR873-201ENST00000401120 77 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.06□□□□□ -2.24
SYCE3A1L190 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.06□□□□□ -2.24
SYCE3A1L190 AC093850.1-201ENST00000454121 251 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 RNU6-322P-201ENST00000516010 103 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 RNU6-1278P-201ENST00000516130 107 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 RNU6-718P-201ENST00000516166 105 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 Y_RNA.708-201ENST00000516950 96 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 AL358944.1-201ENST00000528537 144 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.06□□□□□ -2.24
SYCE3A1L190 AL357312.1-201ENST00000603879 298 ntBASIC1.06□□□□□ -2.24
SYCE3A1L190 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SYCE3A1L190 SNORD114-7-201ENST00000362520 77 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 Y_RNA.363-201ENST00000365529 113 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SYCE3A1L190 Y_RNA.482-201ENST00000384377 111 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 AL353997.1-201ENST00000432936 108 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.05□□□□□ -2.24
SYCE3A1L190 RNU7-12P-201ENST00000516030 62 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 SNORD79.1-201ENST00000516069 84 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 AC009229.3-201ENST00000608056 282 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 AC127459.3-201ENST00000624328 466 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 MIR3674-201ENST00000636576 68 ntBASIC1.05□□□□□ -2.24
SYCE3A1L190 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.04□□□□□ -2.24
SYCE3A1L190 Y_RNA.6-201ENST00000362350 114 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 Y_RNA.243-201ENST00000364481 109 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 Y_RNA.358-201ENST00000365491 99 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 RNU6-601P-201ENST00000384540 107 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 MIR520G-201ENST00000385064 90 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 AC002429.1-201ENST00000437672 148 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 Z98949.2-201ENST00000440996 144 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.04□□□□□ -2.24
SYCE3A1L190 SUMO1P2-201ENST00000452524 304 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.04□□□□□ -2.24
SYCE3A1L190 RNU6-625P-201ENST00000459412 107 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 RPL7P42-201ENST00000481005 679 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 RNU6-1291P-201ENST00000516591 104 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 AC022868.1-201ENST00000517767 391 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.04□□□□□ -2.24
SYCE3A1L190 AL117336.2-201ENST00000602435 335 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 AC007014.2-201ENST00000615581 479 ntBASIC1.04□□□□□ -2.24
SYCE3A1L190 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
SYCE3A1L190 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
SYCE3A1L190 Y_RNA.124-201ENST00000363339 93 ntBASIC1.03□□□□□ -2.24
SYCE3A1L190 Y_RNA.404-201ENST00000383978 102 ntBASIC1.03□□□□□ -2.24
SYCE3A1L190 RNA5SP475-201ENST00000410568 110 ntBASIC1.03□□□□□ -2.24
SYCE3A1L190 MTND1P34-201ENST00000438556 671 ntBASIC1.03□□□□□ -2.24
SYCE3A1L190 MTND3P10-201ENST00000450967 341 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms