Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNU6-74P-201ENST00000384235 107 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-447P-201ENST00000410293 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-355P-201ENST00000410427 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-791P-201ENST00000410467 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-705P-201ENST00000410601 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-860P-201ENST00000410860 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-785P-201ENST00000411324 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 MTND1P17-201ENST00000448961 204 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 SCARNA18-201ENST00000459004 134 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD126-201ENST00000459475 77 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD27.1-201ENST00000516319 72 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 SNORD92-201ENST00000585078 85 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 RNU1-29P-201ENST00000606574 126 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 AC091304.9-201ENST00000612091 226 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 U6.90-201ENST00000614007 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 U6.70-201ENST00000620287 104 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 AC099654.13-201ENST00000639774 207 ntBASIC-0.62□□□□□ -2.51
TCRBV3S1A0A5B6 SNORA27.1-201ENST00000362604 124 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 MIR570-201ENST00000384917 97 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 MIR125B2-201ENST00000385128 89 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 RNA5SP163-201ENST00000410304 99 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 MTND4P32-201ENST00000437189 1237 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 AL137792.2-201ENST00000443484 235 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 AC091179.3-201ENST00000474761 144 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.672-201ENST00000516289 104 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 SNORA25.14-201ENST00000516481 132 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-180P-201ENST00000516697 61 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-448P-201ENST00000517052 107 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 RNA5SP330-201ENST00000517096 96 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 AC091144.1-201ENST00000519573 138 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 MTND4P33-201ENST00000556706 766 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 AC138869.1-201ENST00000568623 124 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 AC246785.4-201ENST00000605374 287 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 AC022306.3-201ENST00000619930 550 ntBASIC-0.63□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 RNU4-21P-201ENST00000362802 126 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-46P-201ENST00000383860 107 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-364P-201ENST00000384387 107 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 MIR329-2-201ENST00000385029 84 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 MIR196A2-201ENST00000385189 110 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 SNORA26.5-201ENST00000391215 123 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AC104850.1-201ENST00000435940 476 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AC018710.1-201ENST00000506509 158 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AC092436.3-201ENST00000511788 257 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AC005730.3-201ENST00000583067 366 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 MIR4264-201ENST00000583520 66 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AP000753.3-201ENST00000604083 169 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 MIR3666-201ENST00000607845 111 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AC009878.1-201ENST00000621819 340 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 AC068137.4-201ENST00000638485 296 ntBASIC-0.64□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-407P-201ENST00000365280 104 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 RNU6-136P-201ENST00000384663 107 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 MIR613-201ENST00000385248 95 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 MTCO2P33-201ENST00000402100 465 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 MTCO2P21-201ENST00000419780 677 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 AL512326.2-201ENST00000426359 151 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 RPS29P15-201ENST00000458329 171 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 RNU7-167P-201ENST00000459160 62 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 RNU7-156P-201ENST00000517214 74 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 AC090617.3-201ENST00000573670 475 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 MIR4703-201ENST00000577728 79 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 MIR3941-201ENST00000582572 103 ntBASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.65□□□□□ -2.51
TCRBV3S1A0A5B6 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 RNU6-652P-201ENST00000365488 107 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 SUMO1P3-201ENST00000439961 304 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 ZNF114P1-201ENST00000453500 292 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 AC105417.1-201ENST00000514691 285 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 SNORD45.4-201ENST00000516629 73 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 MIR3152-201ENST00000579801 74 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 AC064836.2-201ENST00000609491 462 ntBASIC-0.66□□□□□ -2.52
TCRBV3S1A0A5B6 AL158209.2-201ENST00000619266 216 ntBASIC-0.66□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms