Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL589743.1-201ENST00000551932 2712 ntBASIC0.27□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-117P-201ENST00000365415 107 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-376P-201ENST00000384731 106 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 RNU1-119P-201ENST00000391122 165 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 PIGPP3-201ENST00000425307 415 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AL137792.2-201ENST00000443484 235 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 PCMTD1P1-201ENST00000455560 355 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 SNORA68.3-201ENST00000515906 83 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC011195.1-201ENST00000578177 177 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 POLR3GP2-201ENST00000588366 668 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC120024.3-201ENST00000603167 156 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC010999.1-201ENST00000611856 324 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 AC100810.6-201ENST00000638068 285 ntBASIC0.26□□□□□ -2.37
TRAV41A0A0B4J266 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1252P-201ENST00000363054 104 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-128P-201ENST00000383976 107 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1105P-201ENST00000384774 107 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 MIR562-201ENST00000384894 95 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 MIR517A-201ENST00000385001 87 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 AC243428.1-201ENST00000421099 264 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 MRPS18CP6-201ENST00000423587 223 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 MTCO2P12-201ENST00000427426 682 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.665-201ENST00000516177 98 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 RN7SKP12-201ENST00000516275 143 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1110P-201ENST00000516462 101 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 AC134698.4-201ENST00000523451 826 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 AC036111.3-201ENST00000526389 112 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 LRRC34P1-201ENST00000542742 915 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 MIR5696-201ENST00000578474 85 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.25□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-222P-201ENST00000362438 107 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1322P-201ENST00000364309 107 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-281P-201ENST00000384212 103 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 MIR216A-201ENST00000385063 110 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1068P-201ENST00000410958 103 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 ELOCP21-201ENST00000412558 336 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC093019.1-201ENST00000443135 252 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 CYCTP-201ENST00000504253 315 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC114811.1-201ENST00000507207 168 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC046134.1-201ENST00000514454 666 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 RN7SKP298-201ENST00000515950 94 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.683-201ENST00000516508 93 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AL138726.1-201ENST00000614873 333 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AL357075.2-201ENST00000614906 189 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 MIR6516-201ENST00000630554 81 ntBASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
TRAV41A0A0B4J266 AC134026.1-201ENST00000623249 2239 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 SNORD114-23-201ENST00000363536 72 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-654P-201ENST00000364373 107 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 MIR516B2-201ENST00000385190 85 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 MIR1298-201ENST00000408783 112 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 RNA5SP222-201ENST00000411039 105 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 AC092447.3-201ENST00000426027 686 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 MTND3P23-201ENST00000431980 347 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 RPS20P10-201ENST00000451209 253 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 PCNPP5-201ENST00000452246 481 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-956P-201ENST00000458868 103 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 RNU7-66P-201ENST00000459469 62 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 RNA5SP134-201ENST00000516492 96 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1096P-201ENST00000517089 102 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 SNORA74.3-201ENST00000517108 154 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 AF235103.2-201ENST00000525753 346 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 AC145350.1-201ENST00000567426 208 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 AC010620.1-201ENST00000601088 1102 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 AC027279.3-201ENST00000625055 122 ntBASIC0.23□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.359-201ENST00000365498 102 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1264P-201ENST00000383891 107 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.405-201ENST00000383979 100 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 SNORA36.2-201ENST00000384004 127 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.451-201ENST00000384200 100 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.524-201ENST00000384564 100 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.533-201ENST00000384596 114 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-136P-201ENST00000384663 107 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.561-201ENST00000384694 100 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1067P-201ENST00000384752 107 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 MIR452-201ENST00000385020 85 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.582-201ENST00000391023 95 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 MIR1302-7-201ENST00000408841 72 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 Y_RNA.615-201ENST00000410769 117 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 RNU6-1001P-201ENST00000411265 100 ntBASIC0.22□□□□□ -2.37
TRAV41A0A0B4J266 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms