Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 MIR521-1-201ENST00000384902 87 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 MIR15B-201ENST00000385045 98 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 SSR1P2-201ENST00000415208 787 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 AC018865.2-201ENST00000423631 129 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 UBE2D3P4-201ENST00000441973 436 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 SNORD123-201ENST00000459473 70 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 AC018710.1-201ENST00000506509 158 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 RNA5SP20-201ENST00000515976 84 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-107P-201ENST00000516643 102 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 AL358944.1-201ENST00000528537 144 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 MIR5583-1-201ENST00000580941 59 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 AC087683.2-201ENST00000611384 326 ntBASIC-0.36□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-873P-201ENST00000363833 107 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-396P-201ENST00000365369 105 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-108P-201ENST00000365558 107 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-136P-201ENST00000384663 107 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 AL359672.1-201ENST00000442302 409 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 GMFBP1-201ENST00000467831 427 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 AC091179.3-201ENST00000474761 144 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 RNA5SP268-201ENST00000516828 124 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 AC091144.1-201ENST00000519573 138 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 MTND2P38-201ENST00000522536 667 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 AL158211.1-201ENST00000566763 763 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 MIR4676-201ENST00000583078 72 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 AC006566.1-201ENST00000608943 513 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.37□□□□□ -2.47
TRAV5A0A0B4J249 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-929P-201ENST00000384429 107 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 MIR548H2-201ENST00000408874 88 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 MTND1P26-201ENST00000440488 538 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 RNU7-56P-201ENST00000458744 62 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 MTND2P31-201ENST00000512602 616 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 RNU7-129P-201ENST00000516128 62 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 AL137161.1-201ENST00000532231 390 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 AC007671.2-201ENST00000637344 619 ntBASIC-0.38□□□□□ -2.47
TRAV5A0A0B4J249 MIR377-201ENST00000362145 69 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AC117470.1-201ENST00000381974 330 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-906P-201ENST00000384700 70 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-205P-201ENST00000390858 107 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-127P-201ENST00000390897 107 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AL049545.1-201ENST00000401856 572 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 RNU2-29P-201ENST00000410423 189 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AC104692.1-201ENST00000472406 90 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AP000240.1-201ENST00000609910 452 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 AC240442.1-201ENST00000616055 283 ntBASIC-0.39□□□□□ -2.47
TRAV5A0A0B4J249 SNORD115-8-201ENST00000363856 82 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 SNORD115-38-201ENST00000365037 82 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-756P-201ENST00000383997 107 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 SNORA8.3-201ENST00000384679 139 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 ZNF114P1-201ENST00000453500 292 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-848P-201ENST00000515948 107 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-617P-201ENST00000516147 107 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-473P-201ENST00000516164 107 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 SCOCP1-201ENST00000554676 349 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 MIR5589-201ENST00000579442 60 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 AC020891.4-201ENST00000605745 93 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 MIR6755-201ENST00000619993 66 ntBASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.4□□□□□ -2.47
TRAV5A0A0B4J249 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 RNU6-784P-201ENST00000384330 106 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 MIR329-1-201ENST00000385028 80 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 HMGN1P33-201ENST00000432945 451 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 snoU109.3-201ENST00000459477 145 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 MTND1P8-201ENST00000571424 950 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 AL355375.2-201ENST00000574825 175 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 MIR3682-201ENST00000581338 84 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 AC068137.4-201ENST00000638485 296 ntBASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
TRAV5A0A0B4J249 SNORD45.3-201ENST00000363836 72 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 Y_RNA.295-201ENST00000364918 102 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 RNU6-456P-201ENST00000384493 107 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 RNU6-925P-201ENST00000384629 104 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 MT-TN-201ENST00000387400 73 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 RNU2-54P-201ENST00000410299 190 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 MIR1912-201ENST00000410389 80 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 AC005042.3-201ENST00000453230 174 ntBASIC-0.42□□□□□ -2.48
TRAV5A0A0B4J249 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms