Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SKP223-201ENST00000410582 62 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RN7SKP192-201ENST00000411291 327 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 AL356379.1-201ENST00000414105 126 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 AC245047.4-201ENST00000433189 144 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RNU7-94P-201ENST00000459576 63 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RPS26P55-201ENST00000471178 356 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RPS27P21-201ENST00000486977 252 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RPS29P21-201ENST00000496272 170 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 AC097462.1-201ENST00000514125 324 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-1143P-201ENST00000516125 104 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-1278P-201ENST00000516130 107 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RNU6-897P-201ENST00000517135 105 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 AC131281.1-201ENST00000522984 164 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RPL21P9-201ENST00000556149 474 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 SNORD113-5-201ENST00000607261 78 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 AL627230.6-201ENST00000611129 280 ntBASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
COL4A3BPQ9Y5P4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 SEPT14P8-201ENST00000508026 178 ntBASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 RNA5SP481-201ENST00000516814 122 ntBASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU7-172P-201ENST00000517125 64 ntBASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.52□□□□□ -2.01
COL4A3BPQ9Y5P4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU1-22P-201ENST00000363334 158 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 SNORA33-201ENST00000363664 130 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-1160P-201ENST00000384546 104 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU2-20P-201ENST00000410425 191 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 DPH3P2-201ENST00000422618 250 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 AC024067.1-201ENST00000426199 223 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 RPS26P45-201ENST00000471748 340 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR1273D-201ENST00000577266 86 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 AC010900.2-201ENST00000604508 210 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.51□□□□□ -2.01
COL4A3BPQ9Y5P4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 Y_RNA.210-201ENST00000364161 110 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 SNORA63D-201ENST00000364359 132 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-710P-201ENST00000410424 105 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-1199P-201ENST00000411249 104 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 AC010409.1-201ENST00000487382 476 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 AL163195.1-201ENST00000496941 348 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-1137P-201ENST00000517073 99 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR4300-201ENST00000581016 96 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR4713-201ENST00000582691 75 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.5□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-505P-201ENST00000384427 107 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-950P-201ENST00000384651 107 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR562-201ENST00000384894 95 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR221-201ENST00000385135 110 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 HSPE1P13-201ENST00000451143 297 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 MRPS17P9-201ENST00000511924 393 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-1046P-201ENST00000516538 107 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 AC136932.1-201ENST00000574771 208 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR6873-201ENST00000622788 63 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 AC127459.3-201ENST00000624328 466 ntBASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.49□□□□□ -2.01
COL4A3BPQ9Y5P4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-296P-201ENST00000384608 107 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-376P-201ENST00000384731 106 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR606-201ENST00000384851 96 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 RPL36AP21-201ENST00000490372 323 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-436P-201ENST00000516171 114 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 AC022254.1-201ENST00000567857 235 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 AC009831.4-201ENST00000620744 325 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 U6.108-201ENST00000637764 58 ntBASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.48□□□□□ -2.01
COL4A3BPQ9Y5P4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 Y_RNA.153-201ENST00000363615 91 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU6-770P-201ENST00000363929 105 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 SNORD115-46-201ENST00000390982 71 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR1261-201ENST00000408659 82 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 MRPS35P2-201ENST00000508242 191 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 RNY3P15-201ENST00000516297 97 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 SNORA31.17-201ENST00000516953 127 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 Y_RNA.720-201ENST00000517166 92 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 RNU7-128P-201ENST00000517247 62 ntBASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.47□□□□□ -2.01
COL4A3BPQ9Y5P4 MIR4648-201ENST00000580107 72 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms