Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 SUMO1P4-201ENST00000429430 302 ntBASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 RNU7-57P-201ENST00000459540 60 ntBASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 AC005840.1-201ENST00000498412 377 ntBASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 DEFB108E-201ENST00000524692 240 ntBASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 AC022441.3-201ENST00000605737 136 ntBASIC2.18□□□□□ -2.06
RAI2Q9Y5P3 MIR410-201ENST00000362222 80 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 RNU6-1266P-201ENST00000362794 105 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 SNORA25B-201ENST00000365507 128 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 Y_RNA.446-201ENST00000384178 104 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 Y_RNA.541-201ENST00000384640 113 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 AL023284.1-201ENST00000403956 276 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 AL137159.1-201ENST00000452808 512 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 MTND4LP30-201ENST00000454092 297 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 AC016925.1-201ENST00000458303 298 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 SNORD127-201ENST00000458892 86 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 RNU7-26P-201ENST00000458980 63 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 RNU6-1132P-201ENST00000459214 107 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 RPL39P38-201ENST00000467018 153 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 RNU6-948P-201ENST00000516374 107 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 SCARNA24.2-201ENST00000516968 130 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 RNU6-1271P-201ENST00000517049 105 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 MIR5194-201ENST00000582634 120 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 AC008749.1-201ENST00000597650 306 ntBASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RAI2Q9Y5P3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 SNORA25.1-201ENST00000362326 128 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 Y_RNA.350-201ENST00000365409 98 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 RNU6-975P-201ENST00000384296 105 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 Y_RNA.489-201ENST00000384410 101 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 RNU6-102P-201ENST00000384485 104 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 Y_RNA.569-201ENST00000384749 103 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 MIR144-201ENST00000384886 86 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 RNU2-54P-201ENST00000410299 190 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 RNU2-38P-201ENST00000410856 79 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 RNU6-57P-201ENST00000411348 103 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 HSPE1P25-201ENST00000455484 251 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 HMGB3P17-201ENST00000504195 649 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 RNU6-1338P-201ENST00000516328 91 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 AC055872.1-201ENST00000570978 278 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 SNORA4-201ENST00000584302 138 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 AL359821.1-201ENST00000605519 182 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 snoZ196.1-201ENST00000625269 89 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 AC131280.1-202ENST00000624067 4211 ntBASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RAI2Q9Y5P3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
RAI2Q9Y5P3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.101-201ENST00000363154 102 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.286-201ENST00000364813 102 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.307-201ENST00000365022 117 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.383-201ENST00000383855 97 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.476-201ENST00000384347 108 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 MIR613-201ENST00000385248 95 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 MIR548H3-201ENST00000408771 118 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 AC024067.1-201ENST00000426199 223 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 RPL23AP3-201ENST00000453844 468 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 SNORA4.4-201ENST00000515921 135 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 RNU2-31P-201ENST00000516954 155 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 AC023157.2-201ENST00000540596 141 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 MIR3684-201ENST00000579779 74 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 MIR3671-201ENST00000580455 88 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 AL590240.4-201ENST00000616908 390 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.07
RAI2Q9Y5P3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 MIR335-201ENST00000362173 94 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.14-201ENST00000362415 103 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 RNU6-418P-201ENST00000384035 107 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 SNORD14D-201ENST00000384390 87 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 RNU6-443P-201ENST00000384780 107 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 MIR1185-2-201ENST00000408687 86 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 AC123900.1-201ENST00000420390 96 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 AC016717.1-201ENST00000448918 286 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 AC093259.1-201ENST00000509755 300 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 RNU2-34P-201ENST00000516534 121 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 AP002001.1-203ENST00000534002 267 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 MIR6845-201ENST00000613182 61 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 AP001282.2-201ENST00000616149 309 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
RAI2Q9Y5P3 AC009487.4-201ENST00000624969 3585 ntBASIC2.13□□□□□ -2.07
RAI2Q9Y5P3 Y_RNA.54-201ENST00000362766 105 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms