Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 U2.5-201ENST00000619465 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 U2.10-201ENST00000620268 191 ntBASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
CLDN16Q9Y5I7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.26-201ENST00000362539 101 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-862P-201ENST00000362804 105 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.105-201ENST00000363182 111 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.149-201ENST00000363558 117 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 RNU1-96P-201ENST00000364163 162 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 AL023284.1-201ENST00000403956 276 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 MIR1283-2-201ENST00000408621 87 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 SNORA11.4-201ENST00000408823 129 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 AP003733.2-201ENST00000529409 171 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 AL137100.2-201ENST00000555786 315 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 AC005786.1-201ENST00000588553 154 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 PRR13P7-201ENST00000605538 430 ntBASIC2.04□□□□□ -2.08
CLDN16Q9Y5I7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-271P-201ENST00000363858 105 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.222-201ENST00000364264 102 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.512-201ENST00000384518 102 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.574-201ENST00000384766 95 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-1105P-201ENST00000384774 107 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 RNA5SP323-201ENST00000391094 133 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 AL355796.1-201ENST00000406706 323 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 RNA5SP425-201ENST00000410336 112 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 RNU6-121P-201ENST00000410525 99 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 RPL21P38-201ENST00000418090 167 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 POLR2KP2-201ENST00000438155 177 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 SUMO1P2-201ENST00000452524 304 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 HMGB3P17-201ENST00000504195 649 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 AC023157.2-201ENST00000540596 141 ntBASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CLDN16Q9Y5I7 Y_RNA.47-201ENST00000362697 108 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.286-201ENST00000364813 102 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AL031003.1-201ENST00000404229 172 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AL135786.1-201ENST00000415892 214 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 HMGN2P38-201ENST00000423806 265 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AC096920.1-201ENST00000423991 241 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AL358176.2-201ENST00000425769 204 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AL121890.1-201ENST00000435457 205 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 SNORA70.12-201ENST00000516084 153 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-966P-201ENST00000516479 104 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-570P-201ENST00000517051 105 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 MIR338-201ENST00000636369 67 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AC005336.3-201ENST00000623833 2679 ntBASIC2.02□□□□□ -2.09
CLDN16Q9Y5I7 AC010615.1-201ENST00000594254 1764 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 RNU4-90P-201ENST00000362773 141 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 SNORD115-30-201ENST00000364117 82 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.287-201ENST00000364853 94 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.329-201ENST00000365209 107 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 SNORA64-201ENST00000384674 134 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 MIR873-201ENST00000401120 77 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 MIR548F4-201ENST00000408515 105 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC024067.1-201ENST00000426199 223 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC104435.1-201ENST00000483483 166 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC010409.1-201ENST00000487382 476 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 RNA5SP20-201ENST00000515976 84 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 MIR5094-201ENST00000578766 85 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 MIR4438-201ENST00000585271 93 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 U1.36-201ENST00000620684 176 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 AC006435.5-201ENST00000624486 112 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.01□□□□□ -2.09
CLDN16Q9Y5I7 SNORA27.1-201ENST00000362604 124 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 Y_RNA.383-201ENST00000383855 97 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 SNORA67.3-201ENST00000384366 140 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNU6-102P-201ENST00000384485 104 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 MIR215-201ENST00000384858 110 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
CLDN16Q9Y5I7 RNA5SP467-201ENST00000391274 118 ntBASIC2□□□□□ -2.09
CLDN16Q9Y5I7 MIR1302-3-201ENST00000408128 138 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms