Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AL137100.2-201ENST00000555786 315 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 MIR4778-201ENST00000577635 80 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 BNIP3P10-201ENST00000605360 577 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 AC084782.3-201ENST00000612282 578 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.62□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-137P-201ENST00000363680 108 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 SNORD115-8-201ENST00000363856 82 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.248-201ENST00000364501 109 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 SNORD115-38-201ENST00000365037 82 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.327-201ENST00000365201 102 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.338-201ENST00000365320 114 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-969P-201ENST00000383900 105 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-842P-201ENST00000384269 107 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-306P-201ENST00000384617 107 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 MIR548K-201ENST00000408406 116 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 MTND3P8-201ENST00000412909 339 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AC243428.1-201ENST00000421099 264 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AL139396.1-201ENST00000421137 167 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 Z82188.1-201ENST00000436709 154 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 MTATP6P13-201ENST00000438531 667 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RPEP5-201ENST00000441137 268 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 SNORD5.1-201ENST00000458800 75 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RPS27P22-201ENST00000478056 241 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AC018710.1-201ENST00000506509 158 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AC046134.1-201ENST00000514454 666 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-237P-201ENST00000515985 71 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.682-201ENST00000516457 100 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-1198P-201ENST00000516904 67 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-273P-201ENST00000516937 96 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 RNA5SP54-201ENST00000516951 92 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 MIR4790-201ENST00000577799 79 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AC011712.1-201ENST00000588959 234 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 snoU13.31-201ENST00000607291 104 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 MIR6078-201ENST00000611069 100 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AC106800.4-201ENST00000614905 153 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 AC008873.1-201ENST00000625051 138 ntBASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.61□□□□□ -2.31
CHTOPQ9Y3Y2 CASC19-280ENST00000642102 1351 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 ZNF299P-201ENST00000406845 1804 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-1266P-201ENST00000362794 105 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-1059P-201ENST00000363752 98 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 SNORD114-27-201ENST00000363766 70 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-595P-201ENST00000363944 107 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-593P-201ENST00000364716 112 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.279-201ENST00000364763 95 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.339-201ENST00000365325 102 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-245P-201ENST00000384020 107 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-17P-201ENST00000384245 107 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 SNORA67.2-201ENST00000384300 149 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.490-201ENST00000384413 102 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-18P-201ENST00000384527 107 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 MIR32-201ENST00000384965 70 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 MIR487A-201ENST00000385009 80 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 MIR153-2-201ENST00000385225 87 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 MIR653-201ENST00000385279 96 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 SNORD41-201ENST00000386967 70 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AC004866.1-201ENST00000411748 78 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AC016909.1-201ENST00000415916 166 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 MTND1P2-201ENST00000430604 821 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 USP9YP30-201ENST00000430729 455 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-221P-201ENST00000459541 99 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AL163540.1-201ENST00000485382 386 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RPL30P10-201ENST00000488148 337 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AC005840.1-201ENST00000498412 377 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-344P-201ENST00000516635 111 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-58P-201ENST00000517143 103 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU1-54P-201ENST00000517181 120 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 MIR4273-201ENST00000582824 84 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 MIR6128-201ENST00000615528 109 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 ZNF204P-201ENST00000416749 2397 ntBASIC0.6□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-845P-201ENST00000362578 103 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.160-201ENST00000363677 92 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.166-201ENST00000363730 102 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-767P-201ENST00000384132 107 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.482-201ENST00000384377 111 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 Y_RNA.533-201ENST00000384596 114 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 MIR520E-201ENST00000384867 87 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 MT-TL1-201ENST00000386347 75 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 RNU6-159P-201ENST00000391080 106 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 AL355796.1-201ENST00000406706 323 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 MIR548F5-201ENST00000408421 86 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 AC074085.1-201ENST00000413598 418 ntBASIC0.59□□□□□ -2.31
CHTOPQ9Y3Y2 AC005002.2-201ENST00000438228 269 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms