Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 Y_RNA.683-201ENST00000516508 93 ntBASIC0.43□□□□□ -2.34
RHBDD3Q9Y3P4 AC091144.1-201ENST00000519573 138 ntBASIC0.43□□□□□ -2.34
RHBDD3Q9Y3P4 AC109810.1-201ENST00000534066 224 ntBASIC0.43□□□□□ -2.34
RHBDD3Q9Y3P4 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.43□□□□□ -2.34
RHBDD3Q9Y3P4 MTATP6P24-201ENST00000576835 677 ntBASIC0.43□□□□□ -2.34
RHBDD3Q9Y3P4 AL512605.2-201ENST00000592972 256 ntBASIC0.43□□□□□ -2.34
RHBDD3Q9Y3P4 Y_RNA.122-201ENST00000363331 96 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 Y_RNA.231-201ENST00000364358 102 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 Y_RNA.330-201ENST00000365230 109 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 MTCYBP10-201ENST00000424905 650 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AL162725.1-201ENST00000435405 301 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 Y_RNA.695-201ENST00000516715 107 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AP003716.2-201ENST00000528260 108 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 LRRC34P1-201ENST00000542742 915 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 MIR151B-201ENST00000584249 96 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 MIR3192-201ENST00000584920 77 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AC093913.1-201ENST00000614178 329 ntBASIC0.42□□□□□ -2.34
RHBDD3Q9Y3P4 AC073544.1-201ENST00000600110 1595 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RNU6-254P-201ENST00000363377 107 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 Y_RNA.269-201ENST00000364685 89 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 MIR526A1-201ENST00000384897 85 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RNU5A-5P-201ENST00000411054 116 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RPL30P16-201ENST00000419341 429 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 snoU13.25-201ENST00000458945 104 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RPL30P10-201ENST00000488148 337 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 AC107401.1-201ENST00000503426 685 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RNU7-175P-201ENST00000515915 61 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RNA5SP20-201ENST00000515976 84 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RN7SKP12-201ENST00000516275 143 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RNU6-107P-201ENST00000516643 102 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 UBL5P4-201ENST00000562584 236 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 AC073114.1-201ENST00000612027 490 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 AC097520.1-201ENST00000624435 385 ntBASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
RHBDD3Q9Y3P4 SNORA27.1-201ENST00000362604 124 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 Y_RNA.151-201ENST00000363566 112 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-522P-201ENST00000364497 107 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-1335P-201ENST00000365426 107 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-1264P-201ENST00000383891 107 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 SNORA75-201ENST00000384158 137 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-648P-201ENST00000410190 107 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 AC018865.2-201ENST00000423631 129 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 SUMO1P2-201ENST00000452524 304 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-956P-201ENST00000458868 103 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 AC046134.1-201ENST00000514454 666 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 MIR5000-201ENST00000577717 103 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 AC120024.3-201ENST00000603167 156 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 7SK.10-201ENST00000621414 298 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 AC099654.12-201ENST00000639868 649 ntBASIC0.4□□□□□ -2.35
RHBDD3Q9Y3P4 RNA5SP347-201ENST00000362445 119 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 MIR15B-201ENST00000385045 98 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 Y_RNA.582-201ENST00000391023 95 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 RNU1-119P-201ENST00000391122 165 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 ZNF885P-201ENST00000420174 1098 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 AC092447.3-201ENST00000426027 686 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 ERLEC1P1-201ENST00000433806 578 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-229P-201ENST00000516614 102 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 RNU11-2P-201ENST00000516898 142 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 MIR5696-201ENST00000578474 85 ntBASIC0.39□□□□□ -2.35
RHBDD3Q9Y3P4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 SNORD18A-201ENST00000363753 72 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 RNA5SP48-201ENST00000363969 126 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-407P-201ENST00000365280 104 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 SNORD111-201ENST00000408139 94 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 USMG5P1-201ENST00000425964 177 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 AL137792.2-201ENST00000443484 235 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 AC018710.1-201ENST00000506509 158 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-1291P-201ENST00000516591 104 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-835P-201ENST00000516974 104 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 AL158211.1-201ENST00000566763 763 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 AC023827.1-201ENST00000569247 97 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-89P-201ENST00000606519 100 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
RHBDD3Q9Y3P4 RNU4-41P-201ENST00000364426 143 ntBASIC0.37□□□□□ -2.35
RHBDD3Q9Y3P4 Y_RNA.490-201ENST00000384413 102 ntBASIC0.37□□□□□ -2.35
RHBDD3Q9Y3P4 RNU6-95P-201ENST00000384697 107 ntBASIC0.37□□□□□ -2.35
RHBDD3Q9Y3P4 Z98949.2-201ENST00000440996 144 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms