Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RNA5SP361-201ENST00000362686 118 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 RNU6-596P-201ENST00000365395 98 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 RNU6-281P-201ENST00000384212 103 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 RNU6-376P-201ENST00000384731 106 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 MIR499A-201ENST00000384903 122 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 RNU1-139P-201ENST00000391307 165 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 AC104332.1-201ENST00000440471 797 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 AC019235.1-201ENST00000503847 207 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 RNA5SP20-201ENST00000515976 84 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 RNU6-1114P-201ENST00000516022 107 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 AL358944.1-201ENST00000528537 144 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 AL117336.2-201ENST00000602435 335 ntBASIC0.61□□□□□ -2.31
RCL1Q9Y2P8 ZNF299P-201ENST00000406845 1804 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 MIRLET7C-201ENST00000362160 84 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 RNU6-407P-201ENST00000365280 104 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 RNU6-1264P-201ENST00000383891 107 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.405-201ENST00000383979 100 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.451-201ENST00000384200 100 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 RNU6-110P-201ENST00000384508 104 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.524-201ENST00000384564 100 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.561-201ENST00000384694 100 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 SNORA75.2-201ENST00000391138 150 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 SNORA75.3-201ENST00000391231 150 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 RNU2-66P-201ENST00000410650 161 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 AC018865.2-201ENST00000423631 129 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 RNU7-66P-201ENST00000459469 62 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 AL049830.1-201ENST00000468034 425 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 RNU6-1278P-201ENST00000516130 107 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 SNORD111.1-201ENST00000516421 86 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 MIR3672-201ENST00000584290 82 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 AC012557.2-201ENST00000605919 418 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 AC245008.1-201ENST00000608123 476 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 AL391903.3-201ENST00000612158 163 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RCL1Q9Y2P8 MIR96-201ENST00000362288 78 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 SNORA27.1-201ENST00000362604 124 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 RNU6-833P-201ENST00000363486 107 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.212-201ENST00000364177 102 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.224-201ENST00000364308 111 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.238-201ENST00000364441 102 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 SNORD116-11-201ENST00000383882 92 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 RNU6-483P-201ENST00000384088 108 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 MIR520G-201ENST00000385064 90 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 MIR891A-201ENST00000401237 79 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 RNU6-908P-201ENST00000410160 94 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 USP9YP16-201ENST00000430287 407 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 MTND3P23-201ENST00000431980 347 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 USP9YP23-201ENST00000455085 407 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AC018710.1-201ENST00000506509 158 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 Y_RNA.706-201ENST00000516933 99 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AC090617.3-201ENST00000573670 475 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 MIR4452-201ENST00000583004 71 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 FAM106DP-201ENST00000586416 501 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AL353765.1-201ENST00000605514 183 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AL096861.1-201ENST00000610899 123 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 AC104465.1-201ENST00000611365 139 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 Z99129.1-201ENST00000612510 255 ntBASIC0.59□□□□□ -2.31
RCL1Q9Y2P8 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
RCL1Q9Y2P8 RNU6-595P-201ENST00000363944 107 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 Y_RNA.256-201ENST00000364594 104 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 SNORD114-22-201ENST00000365423 72 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 SNORD116-9-201ENST00000384000 95 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 Y_RNA.414-201ENST00000384011 101 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 SNORD116-3-201ENST00000384287 95 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 SNORD116-7-201ENST00000384404 95 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 SNORD116-5-201ENST00000384462 95 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 Y_RNA.533-201ENST00000384596 114 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 RNU6-1291P-201ENST00000516591 104 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 AC022868.1-201ENST00000517767 391 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 AC093023.1-201ENST00000547375 507 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 AC100812.1-201ENST00000607622 580 ntBASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
RCL1Q9Y2P8 RNU1-93P-201ENST00000364704 169 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 RNU5A-5P-201ENST00000411054 116 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 RPS26P5-201ENST00000418544 335 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 AC093019.1-201ENST00000443135 252 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 AL137792.2-201ENST00000443484 235 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 AC117454.1-201ENST00000491120 168 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 MIR3973-201ENST00000579824 107 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 AC073544.1-201ENST00000600110 1595 ntBASIC0.57□□□□□ -2.32
RCL1Q9Y2P8 RNY3P3-201ENST00000363816 102 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 168.6 ms