Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC009248.2-201ENST00000619826 254 ntBASIC0.95□□□□□ -2.26
CTNNA3Q9UI47 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.95□□□□□ -2.26
CTNNA3Q9UI47 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 MIR562-201ENST00000384894 95 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 MIR181A1-201ENST00000385026 110 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 MIR660-201ENST00000385235 97 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 SNORA12.1-201ENST00000390873 148 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 RNU2-64P-201ENST00000411315 191 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 AC063976.4-201ENST00000421971 163 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 Z83846.1-201ENST00000446798 265 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 MTND4P18-201ENST00000447010 465 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 AC091179.3-201ENST00000474761 144 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 RPL30P10-201ENST00000488148 337 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 AC010598.1-201ENST00000510378 103 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 RNU7-175P-201ENST00000515915 61 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 RNA5SP454-201ENST00000517231 127 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 FRG2DP-202ENST00000566967 323 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 MIR4714-201ENST00000580728 77 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 SNORA28-201ENST00000606769 126 ntBASIC0.94□□□□□ -2.26
CTNNA3Q9UI47 RNU4-79P-201ENST00000362764 141 ntBASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 Y_RNA.179-201ENST00000363844 90 ntBASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 SNORD12-201ENST00000391002 90 ntBASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 APOOP3-201ENST00000536787 586 ntBASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 AC133485.1-201ENST00000567176 124 ntBASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 AC138907.6-201ENST00000568401 126 ntBASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.93□□□□□ -2.26
CTNNA3Q9UI47 RNU6-595P-201ENST00000363944 107 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 Y_RNA.194-201ENST00000363985 102 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 SNORD87-201ENST00000364849 89 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 Y_RNA.415-201ENST00000384012 112 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 RNU6-541P-201ENST00000384709 110 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 MIR10B-201ENST00000385011 110 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 RNU6-780P-201ENST00000391030 104 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 RNA5SP118-201ENST00000410385 109 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 MTCO3P19-201ENST00000415864 321 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 AL590632.1-201ENST00000424289 371 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 MRPS10P1-201ENST00000448483 130 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 SNORD65B-201ENST00000459126 73 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 PDCD5P2-201ENST00000507570 312 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 PSMC1P5-201ENST00000512850 177 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 RNU6-506P-201ENST00000516553 94 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 RNU6-922P-201ENST00000516753 99 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 RNU7-28P-201ENST00000516759 62 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 AC109635.3-201ENST00000529536 185 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 GHRLOS.1-201ENST00000610995 70 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 AC010487.4-201ENST00000637027 61 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 MIR6866-201ENST00000638146 69 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 ZNF299P-201ENST00000406845 1804 ntBASIC0.92□□□□□ -2.26
CTNNA3Q9UI47 Y_RNA.30-201ENST00000362572 97 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 Y_RNA.38-201ENST00000362617 102 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 SNORD114-23-201ENST00000363536 72 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 RNU6-332P-201ENST00000391193 108 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 USMG5P1-201ENST00000425964 177 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 AC005002.2-201ENST00000438228 269 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 Y_RNA.704-201ENST00000516851 102 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 AL590705.4-201ENST00000532209 134 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 MIR5695-201ENST00000579717 85 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 AC068790.6-201ENST00000602558 258 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 AC013244.2-201ENST00000603396 103 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 MIR924-201ENST00000638017 53 ntBASIC0.91□□□□□ -2.26
CTNNA3Q9UI47 MIR410-201ENST00000362222 80 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 RNY4P14-201ENST00000363656 96 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 RNU6-281P-201ENST00000384212 103 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 RNU6-505P-201ENST00000384427 107 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 RNU6-1186P-201ENST00000410429 97 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 MTATP6P13-201ENST00000438531 667 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 SNORD124-201ENST00000459577 104 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 AC048334.1-201ENST00000477975 159 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 RNU6-1114P-201ENST00000516022 107 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 RNU6-864P-201ENST00000516256 108 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 AC090049.2-201ENST00000550377 109 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 AL121579.1-201ENST00000555129 305 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 MIR4438-201ENST00000585271 93 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 AC010999.1-201ENST00000611856 324 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 AC048344.4-201ENST00000619744 527 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 AC024614.3-201ENST00000637860 256 ntBASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.184-201ENST00000363884 108 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 RNU4-76P-201ENST00000364509 141 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 SNORD116-2-201ENST00000384274 95 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 SNORD116-6-201ENST00000384711 96 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 AC105758.1-201ENST00000506038 399 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 AC046134.1-201ENST00000514454 666 ntBASIC0.89□□□□□ -2.27
CTNNA3Q9UI47 Y_RNA.683-201ENST00000516508 93 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms