Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-1119P-201ENST00000384349 108 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 MIR942-201ENST00000401111 86 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AL355796.1-201ENST00000406706 323 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 ERLEC1P1-201ENST00000433806 578 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AL606489.2-201ENST00000433886 234 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 PCNPP5-201ENST00000452246 481 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 PCMTD1P1-201ENST00000455560 355 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 TPT1P7-201ENST00000458300 517 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AC083798.1-201ENST00000472671 131 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AC105313.1-201ENST00000509121 353 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AP002001.1-203ENST00000534002 267 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AC106800.4-201ENST00000614905 153 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 MIR1321-201ENST00000637766 79 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 AC121333.1-201ENST00000567488 2709 ntBASIC0.46□□□□□ -2.34
CCDC88CQ9P219 MIRLET7C-201ENST00000362160 84 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNU6-1085P-201ENST00000363576 107 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNU6-454P-201ENST00000364292 107 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.301-201ENST00000364990 103 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.372-201ENST00000365599 102 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNU1-119P-201ENST00000391122 165 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 USMG5P1-201ENST00000425964 177 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 MTND1P29-201ENST00000448112 647 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC074133.1-201ENST00000515696 183 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNA5SP255-201ENST00000516370 107 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AL121579.1-201ENST00000555129 305 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC88CQ9P219 MIR4438-201ENST00000585271 93 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 SNORD11B-201ENST00000607707 90 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC092954.2-201ENST00000609103 430 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AL359880.1-201ENST00000621879 266 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC106754.2-201ENST00000623006 233 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC099654.12-201ENST00000639868 649 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNU6-1090P-201ENST00000364065 94 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNU6-842P-201ENST00000384269 107 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.554-201ENST00000384672 102 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNA5SP494-201ENST00000410653 129 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC88CQ9P219 snoU13.6-201ENST00000458785 104 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNU6-956P-201ENST00000458868 103 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AL049830.1-201ENST00000468034 425 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC107401.1-201ENST00000503426 685 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 ACA64.5-201ENST00000516207 127 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNU6-947P-201ENST00000516264 106 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 RNA5SP168-201ENST00000516642 112 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC004817.2-201ENST00000561794 651 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 MIR3611-201ENST00000584484 83 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 POLR3GP2-201ENST00000588366 668 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AL390123.1-201ENST00000603216 237 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC040896.1-201ENST00000613819 479 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC104260.1-201ENST00000616660 539 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 SEPT14P17-201ENST00000617978 177 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.45□□□□□ -2.34
CCDC88CQ9P219 AC090617.10-201ENST00000624308 134 ntBASIC0.45□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.178-201ENST00000363832 102 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 RNU6-280P-201ENST00000364145 104 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 SNORD116-2-201ENST00000384274 95 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 SNORD116-6-201ENST00000384711 96 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 RNU6-1031P-201ENST00000384773 107 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 MIR521-1-201ENST00000384902 87 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 MIR660-201ENST00000385235 97 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 MIR653-201ENST00000385279 96 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 RNU6-440P-201ENST00000390882 105 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 MIR1185-1-201ENST00000408598 86 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 ELOCP21-201ENST00000412558 336 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.44□□□□□ -2.34
CCDC88CQ9P219 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.44□□□□□ -2.34
CCDC88CQ9P219 HMGN1P33-201ENST00000432945 451 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 AC004386.2-201ENST00000441858 148 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 RNU4-49P-201ENST00000516080 140 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 MTND1P5-201ENST00000517906 940 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 MIR5695-201ENST00000579717 85 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 AC019193.3-201ENST00000609144 554 ntBASIC0.44□□□□□ -2.34
CCDC88CQ9P219 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.115-201ENST00000363272 98 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNU6-128P-201ENST00000383976 107 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.404-201ENST00000383978 102 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.436-201ENST00000384097 102 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNU6-1145P-201ENST00000384246 107 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNU6-790P-201ENST00000384479 105 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 SNORA12.1-201ENST00000390873 148 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 SNORD99-201ENST00000408612 74 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNA5SP504-201ENST00000410676 117 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 MTATP6P13-201ENST00000438531 667 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 SEPT14P3-201ENST00000439401 183 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AL732372.2-207ENST00000445840 183 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 SEPT14P2-201ENST00000453405 183 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC0.43□□□□□ -2.34
CCDC88CQ9P219 SEPT14P4-201ENST00000513445 186 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 Y_RNA.704-201ENST00000516851 102 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNA5SP330-201ENST00000517096 96 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.43□□□□□ -2.34
CCDC88CQ9P219 FO082796.1-201ENST00000523795 183 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 AC005562.2-201ENST00000618264 111 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNU6-376P-201ENST00000384731 106 ntBASIC0.43□□□□□ -2.34
CCDC88CQ9P219 RNU2-70P-201ENST00000410718 179 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms