Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 MIR3674-201ENST00000636576 68 ntBASIC1.68□□□□□ -2.14
NDE1Q9NXR1 RNU1-58P-201ENST00000362413 163 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.26-201ENST00000362539 101 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.105-201ENST00000363182 111 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.210-201ENST00000364161 110 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.526-201ENST00000384572 110 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.551-201ENST00000384661 102 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 RNU11-3P-201ENST00000391111 133 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 MRPL35P1-201ENST00000404272 572 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 MIR1252-201ENST00000408861 65 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 RNU2-2P-201ENST00000410396 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.67□□□□□ -2.14
NDE1Q9NXR1 AC060773.1-201ENST00000421698 310 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 HMGN2P3-201ENST00000433603 273 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 HMGN2P5-201ENST00000436882 273 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 AC005002.2-201ENST00000438228 269 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 AL357134.1-201ENST00000445848 426 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 RPL23AP6-201ENST00000446637 472 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.67□□□□□ -2.14
NDE1Q9NXR1 AC245102.2-201ENST00000448956 180 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 AC010655.3-201ENST00000478818 450 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 RNU6-856P-201ENST00000516959 98 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 RNU6-897P-201ENST00000517135 105 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.721-201ENST00000517207 102 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 CYCSP23-201ENST00000519781 313 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 AC136932.1-201ENST00000574771 208 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.772-201ENST00000606692 102 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.15-201ENST00000611544 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.16-201ENST00000613119 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.12-201ENST00000613778 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.20-201ENST00000613956 192 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.9-201ENST00000615427 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.11-201ENST00000616345 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.2-201ENST00000616535 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.3-201ENST00000617785 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.19-201ENST00000618602 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 RNU2-1-201ENST00000618664 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.6-201ENST00000619225 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.5-201ENST00000619465 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 U2.10-201ENST00000620268 191 ntBASIC1.67□□□□□ -2.14
NDE1Q9NXR1 SNORA72.2-201ENST00000365028 127 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 RNU6-806P-201ENST00000365147 105 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 Y_RNA.439-201ENST00000384119 94 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AC019129.1-201ENST00000403786 261 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 RNU4-30P-201ENST00000410245 143 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NDE1Q9NXR1 ELOCP20-201ENST00000422460 345 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 MTND2P23-201ENST00000422990 651 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 TOMM22P2-201ENST00000430735 237 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 RNU6-221P-201ENST00000459541 99 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AC025647.1-201ENST00000517879 253 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AC005176.2-201ENST00000596933 147 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AC008737.2-201ENST00000599446 118 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AL773524.1-201ENST00000614065 229 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AC010205.1-201ENST00000616668 449 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 AC022513.1-201ENST00000624512 117 ntBASIC1.66□□□□□ -2.14
NDE1Q9NXR1 RNA5SP99-201ENST00000364020 114 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.422-201ENST00000384054 114 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 RNU6-738P-201ENST00000384531 106 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 MIR29C-201ENST00000385231 88 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 RNA5SP475-201ENST00000410568 110 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 HMGN2P34-201ENST00000437647 269 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.65□□□□□ -2.15
NDE1Q9NXR1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 MRPS35P2-201ENST00000508242 191 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 AC011406.1-201ENST00000512440 370 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 RNU2-34P-201ENST00000516534 121 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.720-201ENST00000517166 92 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 AL353997.5-201ENST00000618886 171 ntBASIC1.65□□□□□ -2.15
NDE1Q9NXR1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NDE1Q9NXR1 SNORA33-201ENST00000363664 130 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.162-201ENST00000363683 102 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 SNORA67.3-201ENST00000384366 140 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.512-201ENST00000384518 102 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 MIR764-201ENST00000390811 85 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 RNU6-121P-201ENST00000410525 99 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.64□□□□□ -2.15
NDE1Q9NXR1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NDE1Q9NXR1 RNU1-131P-201ENST00000458943 161 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 RNA5SP458-201ENST00000516188 119 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 RNU6-327P-201ENST00000516270 127 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 RNY3P15-201ENST00000516297 97 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NDE1Q9NXR1 AP000648.3-201ENST00000623539 4507 ntBASIC1.64□□□□□ -2.15
NDE1Q9NXR1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.64□□□□□ -2.15
NDE1Q9NXR1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
NDE1Q9NXR1 MIR410-201ENST00000362222 80 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 SNORD114-1-201ENST00000362705 72 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 RNU6-862P-201ENST00000362804 105 ntBASIC1.63□□□□□ -2.15
NDE1Q9NXR1 Y_RNA.214-201ENST00000364201 112 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms