Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RNU1-96P-201ENST00000364163 162 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 RNU6-855P-201ENST00000410395 104 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.5□□□□□ -2.01
MKS1Q9NXB0 AC010154.1-201ENST00000425857 269 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 AC010409.1-201ENST00000487382 476 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.680-201ENST00000516441 93 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 AC022080.3-201ENST00000544433 482 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 MIR3128-201ENST00000581957 66 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 AC007229.1-201ENST00000590455 412 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.5□□□□□ -2.01
MKS1Q9NXB0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AL356292.1-201ENST00000283110 373 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 UBE2WP1-201ENST00000362030 340 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.368-201ENST00000365547 113 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.416-201ENST00000384014 113 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 MIR515-2-201ENST00000384883 83 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 MIR515-1-201ENST00000384884 83 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 MIR128-1-201ENST00000384921 82 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AL603910.2-201ENST00000407268 136 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AL135790.2-201ENST00000437701 267 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 S100A11P2-201ENST00000467589 312 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.49□□□□□ -2.01
MKS1Q9NXB0 RNU7-172P-201ENST00000517125 64 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AC010900.2-201ENST00000604508 210 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AL359075.3-201ENST00000613288 217 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.49□□□□□ -2.01
MKS1Q9NXB0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
MKS1Q9NXB0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
MKS1Q9NXB0 AC245060.5-201ENST00000610778 3293 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.275-201ENST00000364726 110 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.310-201ENST00000365063 113 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.341-201ENST00000365341 102 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 RNU6-117P-201ENST00000365415 107 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.456-201ENST00000384232 111 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.477-201ENST00000384352 108 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 SNORA44-201ENST00000384584 132 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 SNORD23.1-201ENST00000408212 104 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 SNORA11.4-201ENST00000408823 129 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 RNU6-1186P-201ENST00000410429 97 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 EBAG9P1-201ENST00000418955 543 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 RNU6-1271P-201ENST00000517049 105 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 AC136628.3-201ENST00000521868 290 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 MIR4529-201ENST00000578110 78 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.48□□□□□ -2.01
MKS1Q9NXB0 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.48□□□□□ -2.01
MKS1Q9NXB0 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.48□□□□□ -2.01
MKS1Q9NXB0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
MKS1Q9NXB0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
MKS1Q9NXB0 SNORA33-201ENST00000363664 130 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.478-201ENST00000384358 107 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MKS1Q9NXB0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
MKS1Q9NXB0 RNU6-1023P-201ENST00000516137 106 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 RNU7-99P-201ENST00000516271 62 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.673-201ENST00000516306 88 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 MIR514B-201ENST00000516774 80 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 RNU7-128P-201ENST00000517247 62 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.47□□□□□ -2.01
MKS1Q9NXB0 AC110588.1-201ENST00000559699 137 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 AC006023.1-201ENST00000603944 259 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 AC005000.2-201ENST00000605468 310 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 U6.108-201ENST00000637764 58 ntBASIC2.47□□□□□ -2.01
MKS1Q9NXB0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.47□□□□□ -2.01
MKS1Q9NXB0 AC016717.2-201ENST00000609089 5141 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.54-201ENST00000362766 105 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.217-201ENST00000364214 105 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.277-201ENST00000364754 102 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RNU6-662P-201ENST00000384253 104 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 SNORD116-13-201ENST00000384408 92 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 SNORA48.2-201ENST00000390926 124 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RNA5SP450-201ENST00000411206 102 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 OOSP1P1-201ENST00000423265 274 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 AC018634.1-201ENST00000437554 401 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RPS20P10-201ENST00000451209 253 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.641-201ENST00000459414 105 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RNU6-1278P-201ENST00000516130 107 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RNU1-142P-201ENST00000516682 145 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RNU6-63P-201ENST00000516690 95 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 RNU2-19P-201ENST00000517288 84 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 AC024995.1-201ENST00000523014 93 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.46□□□□□ -2.02
MKS1Q9NXB0 AC004832.4-201ENST00000608952 331 ntBASIC2.46□□□□□ -2.02
MKS1Q9NXB0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
MKS1Q9NXB0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MKS1Q9NXB0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
MKS1Q9NXB0 AL596028.1-201ENST00000326971 197 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.20-201ENST00000362479 113 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 Y_RNA.60-201ENST00000362831 98 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 RNU6-525P-201ENST00000363685 104 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 RNU6-801P-201ENST00000364087 105 ntBASIC2.45□□□□□ -2.02
MKS1Q9NXB0 RNU6-740P-201ENST00000364734 105 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms