Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 MIR4255-201ENST00000579351 72 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 AL359757.2-201ENST00000624309 274 ntBASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CHCHD3Q9NX63 RNU6-99P-201ENST00000364721 107 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 RNU6-1297P-201ENST00000384415 104 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 SNORA67.5-201ENST00000391036 107 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 AC005002.2-201ENST00000438228 269 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 RNA5SP20-201ENST00000515976 84 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 SNORA31.10-201ENST00000516482 106 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 RNU6-911P-201ENST00000516523 104 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 AC023157.2-201ENST00000540596 141 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 MIR4524B-201ENST00000581569 115 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 AC073413.2-201ENST00000604332 360 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 AL355073.2-201ENST00000612106 557 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 AL357075.2-201ENST00000614906 189 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 AC073349.3-201ENST00000617616 186 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 AC084768.2-201ENST00000622736 221 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 MIR6079-201ENST00000635807 62 ntBASIC1.43□□□□□ -2.18
CHCHD3Q9NX63 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 Y_RNA.474-201ENST00000384341 102 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 RNU6-310P-201ENST00000384655 107 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 MIR520G-201ENST00000385064 90 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 AL355796.1-201ENST00000406706 323 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 Y_RNA.592-201ENST00000410274 109 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 RNU6-1156P-201ENST00000410365 100 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 SNORD12B-201ENST00000410433 91 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 AC018865.2-201ENST00000423631 129 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 AC099799.1-201ENST00000439809 192 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 MTND4P17-201ENST00000470444 350 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 AC022493.2-201ENST00000506122 481 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 RNU6-559P-201ENST00000516151 98 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 SNORA25.15-201ENST00000516487 89 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 RNU6-341P-201ENST00000516973 96 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 AL358944.1-201ENST00000528537 144 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 AL161670.1-201ENST00000554348 137 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 MIR1244-1-201ENST00000612829 85 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 AL078604.3-201ENST00000615580 211 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 MIR1244-3-201ENST00000635744 85 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 MIR1244-2-201ENST00000636449 85 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 MIR1244-4-202ENST00000636813 85 ntBASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CHCHD3Q9NX63 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 Y_RNA.387-201ENST00000383918 102 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 RNY3P4-201ENST00000384428 101 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 RNU4-14P-201ENST00000410858 122 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 Y_RNA.646-201ENST00000410980 101 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 FCF1P4-201ENST00000448326 183 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 U8.22-201ENST00000459141 133 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 RPL39P38-201ENST00000467018 153 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 SNORA70.12-201ENST00000516084 153 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 AP002004.2-201ENST00000531656 154 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 MIR3683-201ENST00000580847 82 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 UBE2V2P2-201ENST00000587677 504 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 U6.115-201ENST00000636045 103 ntBASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
CHCHD3Q9NX63 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.384-201ENST00000383909 102 ntBASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 SNORA40.18-201ENST00000391200 128 ntBASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 AL137792.2-201ENST00000443484 235 ntBASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 RNU6-237P-201ENST00000515985 71 ntBASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 AC019176.1-201ENST00000518519 225 ntBASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CHCHD3Q9NX63 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 RNU6-490P-201ENST00000362985 107 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.142-201ENST00000363491 102 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.243-201ENST00000364481 109 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 RNU6-407P-201ENST00000365280 104 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.361-201ENST00000365515 120 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 RNU6-890P-201ENST00000384121 107 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 RNU6-376P-201ENST00000384731 106 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 MIR660-201ENST00000385235 97 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 ELOCP24-201ENST00000456370 334 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 RNU6-470P-201ENST00000515954 104 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 RNU2-56P-201ENST00000516826 190 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 RNU6-1213P-201ENST00000517075 94 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 AC027419.1-201ENST00000522976 328 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 AC087588.2-201ENST00000617667 426 ntBASIC1.39□□□□□ -2.19
CHCHD3Q9NX63 AC091812.1-201ENST00000432235 1948 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 Y_RNA.70-201ENST00000362886 110 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 SNORD78.2-201ENST00000391076 69 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 RNA5SP482-201ENST00000391269 118 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 AL591806.2-201ENST00000433122 173 ntBASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.38□□□□□ -2.19
CHCHD3Q9NX63 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms