Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AP002001.1-203ENST00000534002 267 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.89□□□□□ -2.27
HPF1Q9NWY4 MIR3672-201ENST00000584290 82 ntBASIC0.89□□□□□ -2.27
HPF1Q9NWY4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
HPF1Q9NWY4 SNORA1B-201ENST00000362535 133 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 RNU6-451P-201ENST00000362921 107 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 RNU6-407P-201ENST00000365280 104 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 RNU6-1264P-201ENST00000383891 107 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 RNU6-969P-201ENST00000383900 105 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.405-201ENST00000383979 100 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.451-201ENST00000384200 100 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 SNORA20B-201ENST00000384220 132 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.524-201ENST00000384564 100 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 RNU6-306P-201ENST00000384617 107 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.561-201ENST00000384694 100 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 MTCYBP4-201ENST00000401524 249 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 AC018865.2-201ENST00000423631 129 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 MTND3P23-201ENST00000431980 347 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.88□□□□□ -2.27
HPF1Q9NWY4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.88□□□□□ -2.27
HPF1Q9NWY4 RNU6-1278P-201ENST00000516130 107 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 SNORD111.1-201ENST00000516421 86 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 AC005592.1-201ENST00000566527 1640 ntBASIC0.88□□□□□ -2.27
HPF1Q9NWY4 SNORD116-11-201ENST00000383882 92 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 RNU1-139P-201ENST00000391307 165 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.87□□□□□ -2.27
HPF1Q9NWY4 AC046134.1-201ENST00000514454 666 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.87□□□□□ -2.27
HPF1Q9NWY4 AC093023.1-201ENST00000547375 507 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 FAM106DP-201ENST00000586416 501 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 AC100812.1-201ENST00000607622 580 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 MIR6857-201ENST00000613267 93 ntBASIC0.87□□□□□ -2.27
HPF1Q9NWY4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.87□□□□□ -2.27
HPF1Q9NWY4 RNU6-596P-201ENST00000365395 98 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.86□□□□□ -2.27
HPF1Q9NWY4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.86□□□□□ -2.27
HPF1Q9NWY4 UQCRBP2-201ENST00000447827 297 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 RNU7-90P-201ENST00000459216 62 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 RNA5SP20-201ENST00000515976 84 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 AC026407.1-201ENST00000518369 204 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 AC091178.2-201ENST00000584401 117 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 MIR6767-201ENST00000637302 66 ntBASIC0.86□□□□□ -2.27
HPF1Q9NWY4 RNU6-595P-201ENST00000363944 107 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 RNU6-281P-201ENST00000384212 103 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 SNORD116-13-201ENST00000384408 92 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 MIR520E-201ENST00000384867 87 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 RNU6-332P-201ENST00000391193 108 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 RNU2-16P-201ENST00000410712 136 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.85□□□□□ -2.27
HPF1Q9NWY4 MTND1P1-201ENST00000445453 368 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AC245047.8-201ENST00000456455 284 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 RNU7-21P-201ENST00000459430 62 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 RPS26P48-201ENST00000491713 339 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.85□□□□□ -2.27
HPF1Q9NWY4 SNORA70.12-201ENST00000516084 153 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 RNU6-1291P-201ENST00000516591 104 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AC136628.3-201ENST00000521868 290 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AL117336.2-201ENST00000602435 335 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AL078603.1-201ENST00000603824 313 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AC004832.4-201ENST00000608952 331 ntBASIC0.85□□□□□ -2.27
HPF1Q9NWY4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.85□□□□□ -2.27
HPF1Q9NWY4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
HPF1Q9NWY4 CASC19-280ENST00000642102 1351 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 AC073544.1-201ENST00000600110 1595 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 RNU6-222P-201ENST00000362438 107 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 SNORA27.1-201ENST00000362604 124 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.84□□□□□ -2.27
HPF1Q9NWY4 CBX3P8-201ENST00000532412 525 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.84□□□□□ -2.27
HPF1Q9NWY4 AC090617.3-201ENST00000573670 475 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 MIR1321-201ENST00000637766 79 ntBASIC0.84□□□□□ -2.27
HPF1Q9NWY4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
HPF1Q9NWY4 MIR520G-201ENST00000385064 90 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 SNORA75.2-201ENST00000391138 150 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 SNORA75.3-201ENST00000391231 150 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 AC006461.1-201ENST00000412637 326 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.83□□□□□ -2.28
HPF1Q9NWY4 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 RPEP5-201ENST00000441137 268 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 RPS4XP11-201ENST00000446897 772 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 RPS29P1-201ENST00000465274 159 ntBASIC0.83□□□□□ -2.28
HPF1Q9NWY4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.83□□□□□ -2.28
HPF1Q9NWY4 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.83□□□□□ -2.28
HPF1Q9NWY4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
HPF1Q9NWY4 Y_RNA.38-201ENST00000362617 102 ntBASIC0.82□□□□□ -2.28
HPF1Q9NWY4 Y_RNA.51-201ENST00000362725 102 ntBASIC0.82□□□□□ -2.28
HPF1Q9NWY4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
HPF1Q9NWY4 MIR518E-201ENST00000385252 88 ntBASIC0.82□□□□□ -2.28
HPF1Q9NWY4 MIR891A-201ENST00000401237 79 ntBASIC0.82□□□□□ -2.28
HPF1Q9NWY4 RNU6-1001P-201ENST00000411265 100 ntBASIC0.82□□□□□ -2.28
HPF1Q9NWY4 FABP5P4-201ENST00000437203 171 ntBASIC0.82□□□□□ -2.28
HPF1Q9NWY4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
HPF1Q9NWY4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms