Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC006380.1-201ENST00000603598 186 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 AL359075.3-201ENST00000613288 217 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 U6.73-201ENST00000619194 103 ntBASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
SLC6A13Q9NSD5 AC010615.1-201ENST00000594254 1764 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.101-201ENST00000363154 102 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-271P-201ENST00000363858 105 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 SNORD115-30-201ENST00000364117 82 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-450P-201ENST00000364654 107 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 MIR504-201ENST00000385065 83 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 RNA5SP323-201ENST00000391094 133 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 RNU2-54P-201ENST00000410299 190 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 AL390729.2-201ENST00000416137 156 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 RPL23AP6-201ENST00000446637 472 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 AC010409.1-201ENST00000487382 476 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 AC084364.2-201ENST00000546924 395 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 MIR4438-201ENST00000585271 93 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 PART1_1.1-201ENST00000611761 217 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SLC6A13Q9NSD5 SNORD114-7-201ENST00000362520 77 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 SNORA27.1-201ENST00000362604 124 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.361-201ENST00000365515 120 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-296P-201ENST00000384608 107 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 MIR520A-201ENST00000384862 85 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 MIR873-201ENST00000401120 77 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 MIR1252-201ENST00000408861 65 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 RNU5A-5P-201ENST00000411054 116 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-130P-201ENST00000411112 103 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 RPS27P22-201ENST00000478056 241 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 RNU1-142P-201ENST00000516682 145 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AC027419.1-201ENST00000522976 328 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AC023157.2-201ENST00000540596 141 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 MIR4680-201ENST00000580906 66 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AC022441.3-201ENST00000605737 136 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AL021879.1-201ENST00000611756 288 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 AC040896.1-201ENST00000613819 479 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SLC6A13Q9NSD5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 SNORA63D-201ENST00000364359 132 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-1175P-201ENST00000365200 107 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.380-201ENST00000365663 111 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.446-201ENST00000384178 104 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-1011P-201ENST00000384668 107 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 MRPS17P9-201ENST00000511924 393 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 RNU7-128P-201ENST00000517247 62 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 AP003072.1-201ENST00000531740 145 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 AL442663.2-201ENST00000554385 511 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 MIR4713-201ENST00000582691 75 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 U6.108-201ENST00000637764 58 ntBASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.86□□□□□ -2.11
SLC6A13Q9NSD5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-407P-201ENST00000365280 104 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-639P-201ENST00000384074 107 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.455-201ENST00000384230 98 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 SNORD63-201ENST00000384262 68 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.527-201ENST00000384573 102 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 AC005042.3-201ENST00000453230 174 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 HMGB3P17-201ENST00000504195 649 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 AC097462.1-201ENST00000514125 324 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 RNA5SP20-201ENST00000515976 84 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 RNU7-99P-201ENST00000516271 62 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 RNU6-155P-201ENST00000516347 100 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 SNORA31.17-201ENST00000516953 127 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 RAC1P9-201ENST00000604990 392 ntBASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
SLC6A13Q9NSD5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 RNU1-22P-201ENST00000363334 158 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 Y_RNA.143-201ENST00000363520 106 ntBASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SLC6A13Q9NSD5 AL031003.1-201ENST00000404229 172 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms