Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
VTA1Q9NP79 CENPCP1-201ENST00000533085 2578 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 MIR340-201ENST00000362125 95 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 Y_RNA.16-201ENST00000362421 102 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 Y_RNA.20-201ENST00000362479 113 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 Y_RNA.44-201ENST00000362676 108 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 RNU1-91P-201ENST00000364746 163 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 Y_RNA.329-201ENST00000365209 107 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 RNU1-138P-201ENST00000384093 164 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 MIR515-2-201ENST00000384883 83 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 MIR515-1-201ENST00000384884 83 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 MIR1253-201ENST00000408273 105 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 RNU2-61P-201ENST00000411069 191 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.68□□□□□ -1.98
VTA1Q9NP79 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.68□□□□□ -1.98
VTA1Q9NP79 SNORA27.4-201ENST00000516650 95 ntBASIC2.68□□□□□ -1.98
VTA1Q9NP79 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 SNORA27.1-201ENST00000362604 124 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 SNORA20.1-201ENST00000364790 130 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 Y_RNA.418-201ENST00000384029 102 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 SNORA20B-201ENST00000384220 132 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 MIR504-201ENST00000385065 83 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 MIR1262-201ENST00000408276 93 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.67□□□□□ -1.98
VTA1Q9NP79 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.67□□□□□ -1.98
VTA1Q9NP79 RPS12P2-201ENST00000439728 269 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.67□□□□□ -1.98
VTA1Q9NP79 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.67□□□□□ -1.98
VTA1Q9NP79 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.67□□□□□ -1.98
VTA1Q9NP79 AL137100.2-201ENST00000555786 315 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.67□□□□□ -1.98
VTA1Q9NP79 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.15-201ENST00000611544 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.16-201ENST00000613119 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.12-201ENST00000613778 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.20-201ENST00000613956 192 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.9-201ENST00000615427 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.11-201ENST00000616345 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.2-201ENST00000616535 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.3-201ENST00000617785 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.19-201ENST00000618602 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 RNU2-1-201ENST00000618664 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.6-201ENST00000619225 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.5-201ENST00000619465 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 U2.10-201ENST00000620268 191 ntBASIC2.67□□□□□ -1.98
VTA1Q9NP79 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.67□□□□□ -1.98
VTA1Q9NP79 SNORD58.1-201ENST00000391313 66 ntBASIC2.66□□□□□ -1.98
VTA1Q9NP79 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.66□□□□□ -1.98
VTA1Q9NP79 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
VTA1Q9NP79 RPL23AP7-203ENST00000449021 469 ntBASIC2.66□□□□□ -1.98
VTA1Q9NP79 SCARNA24.2-201ENST00000516968 130 ntBASIC2.66□□□□□ -1.98
VTA1Q9NP79 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.66□□□□□ -1.98
VTA1Q9NP79 MIR5007-201ENST00000583098 95 ntBASIC2.66□□□□□ -1.98
VTA1Q9NP79 AC067747.1-201ENST00000608026 250 ntBASIC2.66□□□□□ -1.98
VTA1Q9NP79 MIR7843-201ENST00000622274 79 ntBASIC2.66□□□□□ -1.98
VTA1Q9NP79 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.66□□□□□ -1.98
VTA1Q9NP79 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
VTA1Q9NP79 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.65□□□□□ -1.98
VTA1Q9NP79 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
VTA1Q9NP79 Y_RNA.456-201ENST00000384232 111 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 AL355796.1-201ENST00000406706 323 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 MRPS10P1-201ENST00000448483 130 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 RPL23AP3-201ENST00000453844 468 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 RPL36AP21-201ENST00000490372 323 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 AC011406.1-201ENST00000512440 370 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 RNU6-191P-201ENST00000516295 94 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 RNU6-966P-201ENST00000516479 104 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 AC009127.3-201ENST00000570531 403 ntBASIC2.65□□□□□ -1.99
VTA1Q9NP79 RNA5SP393-201ENST00000363423 117 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 Y_RNA.275-201ENST00000364726 110 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 Y_RNA.368-201ENST00000365547 113 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 AC016909.1-201ENST00000415916 166 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 AC060773.1-201ENST00000421698 310 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 AC018634.1-201ENST00000437554 401 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 AC091959.1-201ENST00000495857 238 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 MIR4658-201ENST00000584344 65 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 AL031274.2-201ENST00000599419 203 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 DEFB117-201ENST00000602356 141 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 AL078604.3-201ENST00000615580 211 ntBASIC2.64□□□□□ -1.99
VTA1Q9NP79 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.64□□□□□ -1.99
VTA1Q9NP79 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
VTA1Q9NP79 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VTA1Q9NP79 RNU1-58P-201ENST00000362413 163 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 snoU2-30.2-201ENST00000362805 70 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 RNU6-1164P-201ENST00000364428 107 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 DEFA7P-201ENST00000382676 285 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 Y_RNA.552-201ENST00000384665 112 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 ATP5J2P3-201ENST00000451550 258 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 RPS26P55-201ENST00000471178 356 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 RNA5SP20-201ENST00000515976 84 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 AC136628.3-201ENST00000521868 290 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.63□□□□□ -1.99
VTA1Q9NP79 MIR3128-201ENST00000581957 66 ntBASIC2.63□□□□□ -1.99
VTA1Q9NP79 RNU4-80P-201ENST00000363200 141 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 RNU6-23P-201ENST00000363283 107 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 RNA5SP493-201ENST00000364115 91 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 RNA5SP465-201ENST00000391195 109 ntBASIC2.62□□□□□ -1.99
VTA1Q9NP79 AL603910.2-201ENST00000407268 136 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms