Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 Y_RNA.570-201ENST00000384750 101 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 MIR548P-201ENST00000408336 84 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AL139156.1-201ENST00000412785 841 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AL354751.2-201ENST00000415471 210 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AL356320.1-201ENST00000429616 163 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 RPEP5-201ENST00000441137 268 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 snoU13.27-201ENST00000459278 104 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 RPS26P55-201ENST00000471178 356 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 RPL36AP21-201ENST00000490372 323 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 Y_RNA.711-201ENST00000516993 102 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AC020661.2-201ENST00000560114 134 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 SNORA77B-201ENST00000578179 125 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AL390123.1-201ENST00000603216 237 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AC104695.3-201ENST00000604052 296 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AC022441.3-201ENST00000605737 136 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 AC095038.3-201ENST00000634439 195 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 IGHVIII-44-202ENST00000636235 289 ntBASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.66□□□□□ -2.14
CHMP1AQ9HD42 RNU6-1175P-201ENST00000365200 107 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 RNU6-117P-201ENST00000365415 107 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 RNU6-130P-201ENST00000411112 103 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 SUMO1P2-201ENST00000452524 304 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 AC025465.3-201ENST00000510570 311 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.701-201ENST00000516812 110 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 IGKV3-31-201ENST00000523109 329 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.772-201ENST00000606692 102 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 MIR8074-201ENST00000615081 81 ntBASIC1.65□□□□□ -2.15
CHMP1AQ9HD42 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AC018630.2-201ENST00000534866 2403 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 MIR424-201ENST00000362227 98 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 SNORD114-7-201ENST00000362520 77 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 RNU6-203P-201ENST00000384038 104 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.471-201ENST00000384312 102 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.526-201ENST00000384572 110 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 MIR30A-201ENST00000385092 71 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AL031003.1-201ENST00000404229 172 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 RNU2-20P-201ENST00000410425 191 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AC010154.1-201ENST00000425857 269 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 JTBP1-201ENST00000441314 247 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 U8.20-201ENST00000459445 131 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AL163540.1-201ENST00000485382 386 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 RNU6-155P-201ENST00000516347 100 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 MIR3171-201ENST00000584270 74 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AL929325.1-201ENST00000603096 117 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 AC006380.1-201ENST00000603598 186 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 MIR8054-201ENST00000620877 86 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
CHMP1AQ9HD42 RNU6-414P-201ENST00000363705 104 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 RNU4-50P-201ENST00000364361 141 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 SNORA64-201ENST00000384674 134 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 SNORA12.1-201ENST00000390873 148 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 MRPL42P3-201ENST00000401492 326 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 RN7SKP192-201ENST00000411291 327 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 AL161935.2-201ENST00000414627 60 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 AC245047.3-201ENST00000429428 127 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 MTCYBP6-201ENST00000441810 138 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 RNU6-436P-201ENST00000516171 114 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 RNU6-988P-201ENST00000519081 107 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 DEFB122-202ENST00000569013 197 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 MIR5089-201ENST00000580047 84 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 AC091178.2-201ENST00000584401 117 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 AC127459.3-201ENST00000624328 466 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 MIR6079-201ENST00000635807 62 ntBASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.63□□□□□ -2.15
CHMP1AQ9HD42 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-450P-201ENST00000364654 107 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.424-201ENST00000384063 103 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.439-201ENST00000384119 94 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 Y_RNA.462-201ENST00000384268 102 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-937P-201ENST00000384325 106 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-505P-201ENST00000384427 107 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 MIR194-1-201ENST00000384892 85 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-440P-201ENST00000390882 105 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-823P-201ENST00000391042 103 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 AL023284.1-201ENST00000403956 276 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 COX6CP10-201ENST00000416832 224 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 AC091021.1-201ENST00000468051 388 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 AC099513.1-201ENST00000490423 301 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 AC008834.1-201ENST00000511612 175 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-63P-201ENST00000516690 95 ntBASIC1.62□□□□□ -2.15
CHMP1AQ9HD42 RNU6-1153P-201ENST00000516760 105 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms