Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RNU6-833P-201ENST00000363486 107 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-407P-201ENST00000365280 104 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 SNORD116-13-201ENST00000384408 92 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 MIR146A-201ENST00000385201 99 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 MIR942-201ENST00000401111 86 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 RNA5SP118-201ENST00000410385 109 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-1001P-201ENST00000411265 100 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AC006461.1-201ENST00000412637 326 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 EIF1P2-201ENST00000428233 350 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 MTND1P17-201ENST00000448961 204 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 CYCTP-201ENST00000504253 315 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 PSMC1P5-201ENST00000512850 177 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 RNA5SP255-201ENST00000516370 107 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-506P-201ENST00000516553 94 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 MIR3942-201ENST00000585264 109 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AC125232.2-201ENST00000592457 143 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AL117336.2-201ENST00000602435 335 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AC005828.6-201ENST00000606610 232 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AC106800.4-201ENST00000614905 153 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 AC022079.1-201ENST00000621546 602 ntBASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.106-201ENST00000363189 100 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.559-201ENST00000384686 107 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 MIR181A1-201ENST00000385026 110 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 MIR329-1-201ENST00000385028 80 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 MIR100-201ENST00000385259 80 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 ELOCP21-201ENST00000412558 336 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC108667.1-201ENST00000428618 249 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 FABP5P4-201ENST00000437203 171 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC104332.1-201ENST00000440471 797 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC093850.1-201ENST00000454121 251 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-351P-201ENST00000516097 100 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC022868.1-201ENST00000517767 391 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC136628.3-201ENST00000521868 290 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 MIR5701-3-201ENST00000578890 82 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 MIR5701-1-201ENST00000585138 82 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 PRELID3BP2-201ENST00000605362 201 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 MIR5701-2-201ENST00000615634 82 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC104260.1-201ENST00000616660 539 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC027279.3-201ENST00000625055 122 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AC024614.3-201ENST00000637860 256 ntBASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
SND1-IT1Q9HBX3 AL391987.6-201ENST00000305671 199 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.336-201ENST00000365307 109 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-117P-201ENST00000365415 107 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.402-201ENST00000383972 102 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 MIR532-201ENST00000385025 91 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 MIR764-201ENST00000390811 85 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 SNORA75.2-201ENST00000391138 150 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 SNORA75.3-201ENST00000391231 150 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 MIR891A-201ENST00000401237 79 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 AL139396.1-201ENST00000421137 167 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 MTND4LP16-201ENST00000440828 295 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 SNORD5.1-201ENST00000458800 75 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 AL049830.1-201ENST00000468034 425 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-1291P-201ENST00000516591 104 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-1314P-201ENST00000517139 104 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 CBX3P8-201ENST00000532412 525 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 AC024909.2-201ENST00000553035 286 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 FAM71BP1-201ENST00000604431 523 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 AL096861.1-201ENST00000610899 123 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 AC090617.10-201ENST00000624308 134 ntBASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SND1-IT1Q9HBX3 MTND5P16-201ENST00000460269 1703 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 MIR378A-201ENST00000362177 66 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.364-201ENST00000365532 101 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 MIR452-201ENST00000385020 85 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 MIR190B-201ENST00000401119 79 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 RPEP5-201ENST00000441137 268 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 AC093019.1-201ENST00000443135 252 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 RNU6-1096P-201ENST00000517089 102 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 AC120024.3-201ENST00000603167 156 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 BNIP3P10-201ENST00000605360 577 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 AC127459.3-201ENST00000624328 466 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 U6.115-201ENST00000636045 103 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 MIR3662-201ENST00000637030 95 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 MIR6866-201ENST00000638146 69 ntBASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
SND1-IT1Q9HBX3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.52□□□□□ -2.33
SND1-IT1Q9HBX3 RNU6-842P-201ENST00000384269 107 ntBASIC0.52□□□□□ -2.33
SND1-IT1Q9HBX3 RNU6-110P-201ENST00000384508 104 ntBASIC0.52□□□□□ -2.33
SND1-IT1Q9HBX3 MIR526A1-201ENST00000384897 85 ntBASIC0.52□□□□□ -2.33
SND1-IT1Q9HBX3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.52□□□□□ -2.33
SND1-IT1Q9HBX3 USP9YP30-201ENST00000430729 455 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms