Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 AC027419.1-201ENST00000522976 328 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 AC027514.1-201ENST00000588561 1603 ntBASIC0.89□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.405-201ENST00000383979 100 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.451-201ENST00000384200 100 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 SNORA20B-201ENST00000384220 132 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.524-201ENST00000384564 100 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.561-201ENST00000384694 100 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 MIR608-201ENST00000384820 100 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 AL355796.1-201ENST00000406706 323 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 USP9YP16-201ENST00000430287 407 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 USP9YP23-201ENST00000455085 407 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 RNU7-90P-201ENST00000459216 62 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 SNORD124-201ENST00000459577 104 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 RPS29P1-201ENST00000465274 159 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 SNORA70.12-201ENST00000516084 153 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 ACA64.5-201ENST00000516207 127 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 AC136628.3-201ENST00000521868 290 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.88□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-451P-201ENST00000362921 107 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-1013P-201ENST00000384180 107 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-376P-201ENST00000384731 106 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 MIR520G-201ENST00000385064 90 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.704-201ENST00000516851 102 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AC091178.2-201ENST00000584401 117 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 FAM106DP-201ENST00000586416 501 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 AC080078.2-201ENST00000603766 501 ntBASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
LIN28AQ9H9Z2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.267-201ENST00000364679 109 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-332P-201ENST00000391193 108 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 AC114482.1-201ENST00000418010 247 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 FABP5P4-201ENST00000437203 171 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 AC091021.1-201ENST00000468051 388 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 AC074133.1-201ENST00000515696 183 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 RNA5SP20-201ENST00000515976 84 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 AP002001.1-203ENST00000534002 267 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 AC004832.4-201ENST00000608952 331 ntBASIC0.86□□□□□ -2.27
LIN28AQ9H9Z2 MIR373-201ENST00000362273 69 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.533-201ENST00000384596 114 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 AC009161.1-201ENST00000417306 376 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 MTND3P23-201ENST00000431980 347 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 UBE2V1P7-201ENST00000446395 340 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 RNU7-21P-201ENST00000459430 62 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 RNU6-197P-201ENST00000516680 100 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 RNU1-54P-201ENST00000517181 120 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 AC093023.1-201ENST00000547375 507 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 AC008163.1-202ENST00000636004 2889 ntBASIC0.85□□□□□ -2.27
LIN28AQ9H9Z2 SNORD114-7-201ENST00000362520 77 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 SNORA27.1-201ENST00000362604 124 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 RPS3AP1-201ENST00000413190 320 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 UQCRBP2-201ENST00000447827 297 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 PSMC1P5-201ENST00000512850 177 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 PRELID3BP2-201ENST00000605362 201 ntBASIC0.84□□□□□ -2.27
LIN28AQ9H9Z2 AC073544.1-201ENST00000600110 1595 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 SNORA1B-201ENST00000362535 133 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 RNU6-833P-201ENST00000363486 107 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 RNU6-407P-201ENST00000365280 104 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 RNU6-969P-201ENST00000383900 105 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 AC018865.2-201ENST00000423631 129 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 AC245047.8-201ENST00000456455 284 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 AL049830.1-201ENST00000468034 425 ntBASIC0.83□□□□□ -2.28
LIN28AQ9H9Z2 MIR410-201ENST00000362222 80 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 Y_RNA.51-201ENST00000362725 102 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 SNORD116-1-201ENST00000384335 95 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 SNORD116-13-201ENST00000384408 92 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 MIR891A-201ENST00000401237 79 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 MTND4LP16-201ENST00000440828 295 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 AC093019.1-201ENST00000443135 252 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 RPS4XP11-201ENST00000446897 772 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 AC093850.1-201ENST00000454121 251 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 AC018710.1-201ENST00000506509 158 ntBASIC0.82□□□□□ -2.28
LIN28AQ9H9Z2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms