Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC008269.2-201ENST00000561915 1105 ntBASIC1.44□□□□□ -2.18
VIPAS39Q9H9C1 MIR4795-201ENST00000584182 89 ntBASIC1.44□□□□□ -2.18
VIPAS39Q9H9C1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.44□□□□□ -2.18
VIPAS39Q9H9C1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
VIPAS39Q9H9C1 MIR3674-201ENST00000636576 68 ntBASIC1.44□□□□□ -2.18
VIPAS39Q9H9C1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VIPAS39Q9H9C1 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 AC091812.1-201ENST00000432235 1948 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 MRPS10P1-201ENST00000448483 130 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 CHEK2P4-201ENST00000450340 246 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 SNORA31.10-201ENST00000516482 106 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 RNU6-295P-201ENST00000516901 104 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 AC055872.1-201ENST00000570978 278 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 AC073413.2-201ENST00000604332 360 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 U2.1-201ENST00000618978 145 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 AC104985.2-201ENST00000620598 500 ntBASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VIPAS39Q9H9C1 ICE2P2-201ENST00000483823 2787 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 RNU4-73P-201ENST00000363164 141 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 RNU6-338P-201ENST00000383888 105 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 MIR150-201ENST00000385048 84 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 MIR628-201ENST00000385229 95 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 MIR1289-2-201ENST00000408360 111 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 AC245047.3-201ENST00000429428 127 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 RNU7-99P-201ENST00000516271 62 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 MIR2355-201ENST00000517199 87 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 AC104984.5-201ENST00000586878 94 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 AC004467.1-201ENST00000615678 330 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 MIR6715A-201ENST00000615929 79 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 U6.115-201ENST00000636045 103 ntBASIC1.42□□□□□ -2.18
VIPAS39Q9H9C1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 RNU6-136P-201ENST00000384663 107 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 MIR504-201ENST00000385065 83 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 AC018865.2-201ENST00000423631 129 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 MTATP6P23-201ENST00000440153 476 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 RPS26P45-201ENST00000471748 340 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 MTND3P22-201ENST00000510932 243 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 RNA5SP20-201ENST00000515976 84 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 RNU7-172P-201ENST00000517125 64 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 AC019176.1-201ENST00000518519 225 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 AL442163.3-201ENST00000554110 156 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 MIR6845-201ENST00000613182 61 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 MIR8054-201ENST00000620877 86 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 AC138305.3-201ENST00000624988 240 ntBASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
VIPAS39Q9H9C1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-440P-201ENST00000390882 105 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 SNORA26.9-201ENST00000391322 122 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 MTND4LP11-201ENST00000422184 280 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 AL354695.1-201ENST00000427935 228 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 FTH1P12-201ENST00000432137 551 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 AC236972.2-201ENST00000434979 310 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 AC099799.1-201ENST00000439809 192 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 AC112492.4-201ENST00000456549 352 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 SNORD116.3-201ENST00000517176 78 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 AC006600.1-201ENST00000572529 153 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 AL021879.1-201ENST00000611756 288 ntBASIC1.4□□□□□ -2.19
VIPAS39Q9H9C1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 SNORA27.1-201ENST00000362604 124 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 RNU1-22P-201ENST00000363334 158 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 SNORD1A-201ENST00000364968 72 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 Y_RNA.579-201ENST00000390939 94 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 AC007677.1-201ENST00000445757 515 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 AC097462.1-201ENST00000514125 324 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 RN7SKP179-201ENST00000516126 217 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 SNORA25.15-201ENST00000516487 89 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 RNU6-63P-201ENST00000516690 95 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 AP001094.1-201ENST00000579805 193 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 MIR4659A-201ENST00000580269 81 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 MIR8081-201ENST00000611533 95 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 AC021506.2-201ENST00000612354 169 ntBASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
VIPAS39Q9H9C1 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms