Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 Y_RNA.580-201ENST00000391004 95 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 RNU6-131P-201ENST00000391144 107 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 CBX3P9-201ENST00000402326 552 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 RNA5SP201-201ENST00000410316 124 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 AC097463.2-201ENST00000421074 142 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.42□□□□□ -2.02
EBF3Q9H4W6 AC112771.1-201ENST00000463581 102 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 AC140059.1-201ENST00000489238 361 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 MRPS36P2-201ENST00000512569 299 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 DEFB131C-201ENST00000528817 165 ntBASIC2.42□□□□□ -2.02
EBF3Q9H4W6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
EBF3Q9H4W6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
EBF3Q9H4W6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
EBF3Q9H4W6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
EBF3Q9H4W6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.41□□□□□ -2.02
EBF3Q9H4W6 AC016717.2-201ENST00000609089 5141 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.41□□□□□ -2.02
EBF3Q9H4W6 RNU5F-3P-201ENST00000363767 117 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.329-201ENST00000365209 107 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 Y_RNA.412-201ENST00000384001 104 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 RNU2-2P-201ENST00000410396 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 AC092427.1-202ENST00000430569 476 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U8.19-201ENST00000459095 133 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 RPL23AP70-201ENST00000483361 460 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 RNU6-436P-201ENST00000516171 114 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 AP005660.1-201ENST00000522972 293 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.41□□□□□ -2.02
EBF3Q9H4W6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.41□□□□□ -2.02
EBF3Q9H4W6 AP001485.1-201ENST00000604799 199 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 RNU2-4P-201ENST00000606190 192 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.15-201ENST00000611544 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.16-201ENST00000613119 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.12-201ENST00000613778 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.9-201ENST00000615427 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.11-201ENST00000616345 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.2-201ENST00000616535 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.3-201ENST00000617785 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.19-201ENST00000618602 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 RNU2-1-201ENST00000618664 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.6-201ENST00000619225 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.5-201ENST00000619465 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 U2.10-201ENST00000620268 191 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 MIR6873-201ENST00000622788 63 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
EBF3Q9H4W6 MIR3674-201ENST00000636576 68 ntBASIC2.41□□□□□ -2.02
EBF3Q9H4W6 SNORA68.1-201ENST00000364537 132 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 RNU1-51P-201ENST00000365345 176 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 RNU6-245P-201ENST00000384020 107 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 MIR208B-201ENST00000401172 77 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 RNA5SP504-201ENST00000410676 117 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 SUMO1P4-201ENST00000429430 302 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.4□□□□□ -2.03
EBF3Q9H4W6 RNA5SP272-201ENST00000516095 111 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 RNU2-12P-201ENST00000517216 168 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 MIR548AI-201ENST00000579940 88 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 MIR4765-201ENST00000585007 77 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.4□□□□□ -2.03
EBF3Q9H4W6 PCGEM1.1-201ENST00000613431 131 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.4□□□□□ -2.03
EBF3Q9H4W6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.4□□□□□ -2.03
EBF3Q9H4W6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
EBF3Q9H4W6 RNU1-62P-201ENST00000362599 164 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 RNU4-15P-201ENST00000362613 141 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 RNA5SP393-201ENST00000363423 117 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 RNU6-801P-201ENST00000364087 105 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.238-201ENST00000364441 102 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 RNU6-763P-201ENST00000390865 106 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 MIR1289-2-201ENST00000408360 111 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 EIF4EP4-201ENST00000424916 578 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 Z98742.2-201ENST00000431564 187 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 MICF-203ENST00000432679 129 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 SEPT7P4-201ENST00000437076 306 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 RNA5SP112-201ENST00000515937 99 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 SCARNA17.1-201ENST00000516211 143 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 SCARNA17.2-201ENST00000516334 143 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 CYCSP23-201ENST00000519781 313 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 MIR4524B-201ENST00000581569 115 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 SCARNA17.4-201ENST00000614296 143 ntBASIC2.39□□□□□ -2.03
EBF3Q9H4W6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
EBF3Q9H4W6 Y_RNA.7-201ENST00000362352 102 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 RNU6-486P-201ENST00000363116 107 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 SNORD87-201ENST00000364849 89 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 SNORA26.5-201ENST00000391215 123 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 U3.40-201ENST00000408706 208 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
EBF3Q9H4W6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.38□□□□□ -2.03
EBF3Q9H4W6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.38□□□□□ -2.03
EBF3Q9H4W6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.38□□□□□ -2.03
EBF3Q9H4W6 RNA5SP82-201ENST00000516707 92 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 AC103810.1-201ENST00000579873 453 ntBASIC2.38□□□□□ -2.03
EBF3Q9H4W6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 157.8 ms