Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.85□□□□□ -2.11
ZNF541Q9H0D2 AC008873.1-201ENST00000625051 138 ntBASIC1.85□□□□□ -2.11
ZNF541Q9H0D2 RNA5SP361-201ENST00000362686 118 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 RNU6-417P-201ENST00000384712 107 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 SNORA48.1-201ENST00000390879 135 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 MIR1185-2-201ENST00000408687 86 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 MRPS18CP6-201ENST00000423587 223 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 AC096644.2-201ENST00000429278 159 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 AC027575.1-201ENST00000481064 460 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 RNU6-1170P-201ENST00000515974 106 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 AC027419.1-201ENST00000522976 328 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 AL109918.3-201ENST00000603072 338 ntBASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ZNF541Q9H0D2 RNU6-797P-201ENST00000363101 109 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.315-201ENST00000365117 102 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 RNU6-926P-201ENST00000384075 107 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.431-201ENST00000384086 102 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.579-201ENST00000390939 94 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.592-201ENST00000410274 109 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 SNORD12B-201ENST00000410433 91 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 RNA5SP504-201ENST00000410676 117 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 NDUFB4P10-201ENST00000452541 359 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 RN7SKP49-201ENST00000516675 260 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 AC125232.2-201ENST00000592457 143 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 AL133255.1-201ENST00000606374 441 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 AL050343.2-201ENST00000607338 280 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.83□□□□□ -2.12
ZNF541Q9H0D2 RNU6-1145P-201ENST00000384246 107 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 RNU6-221P-201ENST00000459541 99 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 HMGN1P13-201ENST00000505795 138 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 AC025647.1-201ENST00000517879 253 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 AC012493.3-201ENST00000604494 112 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 AC069114.2-201ENST00000604699 304 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 AC087588.2-201ENST00000617667 426 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 U2.1-201ENST00000618978 145 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 PVT1_3.1-201ENST00000620853 95 ntBASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.82□□□□□ -2.12
ZNF541Q9H0D2 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 RNU6-1115P-201ENST00000362490 106 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.394-201ENST00000383942 103 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.463-201ENST00000384271 102 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.535-201ENST00000384612 99 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 RNU6-625P-201ENST00000459412 107 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 AC074133.1-201ENST00000515696 183 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 AC018448.1-201ENST00000552843 316 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 MIR6515-201ENST00000619843 57 ntBASIC1.81□□□□□ -2.12
ZNF541Q9H0D2 RNU6-1301P-201ENST00000362724 104 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 snoU2-30.2-201ENST00000362805 70 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 RNU1-22P-201ENST00000363334 158 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.496-201ENST00000384444 101 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 SNORA8-201ENST00000384574 139 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 TOMM22P2-201ENST00000430735 237 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 RNU6-408P-201ENST00000515910 100 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 RNU1-142P-201ENST00000516682 145 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 AC006600.1-201ENST00000572529 153 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 MIR338-201ENST00000636369 67 ntBASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ZNF541Q9H0D2 MTND4P29-201ENST00000503122 1372 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.5-201ENST00000362334 102 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 SNORA72.2-201ENST00000365028 127 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 RNU6-1310P-201ENST00000384153 107 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 RNU6-1186P-201ENST00000410429 97 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 CST2P1-201ENST00000425770 87 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 SNORA40.9-201ENST00000515895 93 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 AC092447.9-201ENST00000603395 144 ntBASIC1.79□□□□□ -2.12
ZNF541Q9H0D2 AC010615.1-201ENST00000594254 1764 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 Y_RNA.39-201ENST00000362620 98 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 SNORD42.2-201ENST00000365570 69 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 RNU6-318P-201ENST00000384283 103 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 MIR520A-201ENST00000384862 85 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 MTCO3P19-201ENST00000415864 321 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 AC099677.2-201ENST00000436385 175 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 CHEK2P4-201ENST00000450340 246 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 HMGB3P17-201ENST00000504195 649 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 RNU6-976P-201ENST00000516086 111 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 AC084364.2-201ENST00000546924 395 ntBASIC1.78□□□□□ -2.12
ZNF541Q9H0D2 AK6P2-201ENST00000549020 471 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms