Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 Y_RNA.638-201ENST00000459374 113 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 RPS27P22-201ENST00000478056 241 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 APOOP3-201ENST00000536787 586 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AL121579.1-201ENST00000555129 305 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 BNIP3P10-201ENST00000605360 577 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AL021879.1-201ENST00000611756 288 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 AC084782.3-201ENST00000612282 578 ntBASIC1.08□□□□□ -2.24
POLR1EQ9GZS1 RNA5SP361-201ENST00000362686 118 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 MTND1P34-201ENST00000438556 671 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 RPL7P42-201ENST00000481005 679 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC010598.1-201ENST00000510378 103 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC046134.1-201ENST00000514454 666 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 SNORA70.22-201ENST00000517160 124 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 CYCSP23-201ENST00000519781 313 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC105029.1-201ENST00000520250 669 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC090617.3-201ENST00000573670 475 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC009229.3-201ENST00000608056 282 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC027335.2-201ENST00000624030 375 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 SNORD3E-202ENST00000627253 216 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC068137.4-201ENST00000638485 296 ntBASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
POLR1EQ9GZS1 AC018630.2-201ENST00000534866 2403 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 RNY1P16-201ENST00000363063 111 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 SNORA20B-201ENST00000384220 132 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 RNU6-1145P-201ENST00000384246 107 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 AC074085.1-201ENST00000413598 418 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 MTND1P4-201ENST00000435196 415 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 RNU7-87P-201ENST00000459343 62 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 RNU7-94P-201ENST00000459576 63 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 AC018710.1-201ENST00000506509 158 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 AC080078.3-201ENST00000605407 463 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
POLR1EQ9GZS1 RNY1P10-201ENST00000363268 113 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 MTND3P10-201ENST00000450967 341 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AC092991.1-201ENST00000477176 376 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 RNU6-358P-201ENST00000516564 75 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 RNU6-165P-201ENST00000517170 99 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AP002001.1-203ENST00000534002 267 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AC060780.3-201ENST00000589464 80 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AL162424.1-201ENST00000602325 221 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AC012676.2-201ENST00000619258 186 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AL513423.1-201ENST00000621695 132 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AC106754.2-201ENST00000623006 233 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 AC006435.5-201ENST00000624486 112 ntBASIC1.05□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 RNU6-593P-201ENST00000364716 112 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 RNU6-601P-201ENST00000384540 107 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 RNU6-700P-201ENST00000391043 107 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 UQCRBP2-201ENST00000447827 297 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 COX6CP14-201ENST00000469580 174 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 AC097462.1-201ENST00000514125 324 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 SNORA31.4-201ENST00000516049 129 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 RNU6-922P-201ENST00000516753 99 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.708-201ENST00000516950 96 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 AC068790.6-201ENST00000602558 258 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 HSPE1P19-201ENST00000603327 295 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 AC073349.3-201ENST00000617616 186 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 MIR6079-201ENST00000635807 62 ntBASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
POLR1EQ9GZS1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 RNU1-124P-201ENST00000363861 145 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 RNU6-879P-201ENST00000364328 108 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 RNU4-76P-201ENST00000364509 141 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 Y_RNA.358-201ENST00000365491 99 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 RNU6-1264P-201ENST00000383891 107 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 RNU6-318P-201ENST00000384283 103 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 RNU6-505P-201ENST00000384427 107 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 FCF1P9-201ENST00000412546 282 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 MTCYBP10-201ENST00000424905 650 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 STAG3L5P-204ENST00000443759 179 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 UBL5P1-201ENST00000507979 193 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 RNU7-172P-201ENST00000517125 64 ntBASIC1.03□□□□□ -2.24
POLR1EQ9GZS1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms