Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 Y_RNA.28-201ENST00000362554 111 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.128-201ENST00000363391 112 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 RNU6-879P-201ENST00000364328 108 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 SNORD31B-201ENST00000364977 69 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 RNU1-115P-201ENST00000365329 160 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 RNU6-1227P-201ENST00000383981 107 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 RNU6-245P-201ENST00000384020 107 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 RNU6-42P-201ENST00000384165 107 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 MIR548B-201ENST00000385247 97 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 MIR548P-201ENST00000408336 84 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.605-201ENST00000410577 105 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 ELOCP21-201ENST00000412558 336 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC114482.1-201ENST00000418010 247 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 SDAD1P3-201ENST00000427380 333 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC099799.1-201ENST00000439809 192 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC007395.1-201ENST00000451333 677 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC016925.1-201ENST00000458303 298 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC010531.2-201ENST00000465012 153 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 HMGN2P9-201ENST00000476875 229 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 RNU6-344P-201ENST00000516635 111 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 RNU1-117P-201ENST00000517041 158 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AP002001.1-203ENST00000534002 267 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AL160236.1-201ENST00000556317 195 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC026470.2-201ENST00000561492 181 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 MIR4452-201ENST00000583004 71 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC104695.3-201ENST00000604052 296 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AC010999.1-201ENST00000611856 324 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 U2.1-201ENST00000618978 145 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 AL606534.2-204ENST00000635008 178 ntBASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RSPO3Q9BXY4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RNU1-62P-201ENST00000362599 164 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 SNORD115-3-201ENST00000363100 82 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RNU6-961P-201ENST00000363893 105 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RNU6-793P-201ENST00000384233 104 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 MIR30A-201ENST00000385092 71 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RPL21P1-201ENST00000399532 476 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 MIR1283-1-201ENST00000408494 87 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 SRIP3-201ENST00000413200 219 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC009310.1-201ENST00000414414 451 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC123900.1-201ENST00000420390 96 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RNA5SP220-201ENST00000516298 104 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RNU7-4P-201ENST00000516961 62 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC091144.1-201ENST00000519573 138 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC144568.1-201ENST00000520139 137 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC084364.2-201ENST00000546924 395 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AL442163.3-201ENST00000554110 156 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC055872.1-201ENST00000570978 278 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC006600.1-201ENST00000572529 153 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AL356055.1-201ENST00000602528 446 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 RPL17P51-201ENST00000605218 238 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC011476.5-201ENST00000615594 130 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AC022513.1-201ENST00000624512 117 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
RSPO3Q9BXY4 AP000648.3-201ENST00000623539 4507 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 RNU6-280P-201ENST00000364145 104 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 RNU6-926P-201ENST00000384075 107 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AL357139.1-201ENST00000407792 426 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 MIR1283-2-201ENST00000408621 87 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AC139712.2-201ENST00000424302 339 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AC005534.2-201ENST00000431047 433 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AC112492.4-201ENST00000456549 352 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 RPL26P26-201ENST00000480251 434 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 RNU6-966P-201ENST00000516479 104 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 RN7SKP49-201ENST00000516675 260 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 VN1R91P-201ENST00000594377 169 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 PRR13P7-201ENST00000605538 430 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 SNORD11B-201ENST00000607707 90 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AL021879.1-201ENST00000611756 288 ntBASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.19□□□□□ -2.22
RSPO3Q9BXY4 AL590240.4-201ENST00000616908 390 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms