Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MIR181A1-201ENST00000385026 110 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 AL034345.1-201ENST00000407768 123 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 RNU7-94P-201ENST00000459576 63 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 AP000870.1-201ENST00000472927 406 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 AL590705.4-201ENST00000532209 134 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 MIR4714-201ENST00000580728 77 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 AL162424.1-201ENST00000602325 221 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 AC010999.1-201ENST00000611856 324 ntBASIC1.03□□□□□ -2.24
RPAP1Q9BWH6 RNU4-24P-201ENST00000364565 139 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 SNORA12.1-201ENST00000390873 148 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 AC016907.1-201ENST00000419483 435 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 RNU7-40P-201ENST00000516397 64 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 RNU6-165P-201ENST00000517170 99 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 AC091144.1-201ENST00000519573 138 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 APOOP3-201ENST00000536787 586 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 MIR4438-201ENST00000585271 93 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 HSPE1P19-201ENST00000603327 295 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 AL513423.1-201ENST00000621695 132 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 SNORD3E-202ENST00000627253 216 ntBASIC1.02□□□□□ -2.25
RPAP1Q9BWH6 RNY4P14-201ENST00000363656 96 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.184-201ENST00000363884 108 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 RNU6-595P-201ENST00000363944 107 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 RNU6-281P-201ENST00000384212 103 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 DYNLT3P2-201ENST00000442517 295 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC010469.2-201ENST00000496412 480 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 RNU6-864P-201ENST00000516256 108 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 RNU6-1088P-201ENST00000516850 104 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 RNU6-273P-201ENST00000516937 96 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 CYCSP23-201ENST00000519781 313 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC027419.1-201ENST00000522976 328 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 MIR5695-201ENST00000579717 85 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC080013.6-201ENST00000606185 215 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC015540.1-201ENST00000615828 501 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC073349.3-201ENST00000617616 186 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC106754.2-201ENST00000623006 233 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC068137.4-201ENST00000638485 296 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 AC018630.2-201ENST00000534866 2403 ntBASIC1.01□□□□□ -2.25
RPAP1Q9BWH6 ZNF299P-201ENST00000406845 1804 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 USMG5P1-201ENST00000425964 177 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 RPS27P22-201ENST00000478056 241 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 AC010598.1-201ENST00000510378 103 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 RNU6-107P-201ENST00000516643 102 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 DEFB108E-201ENST00000524692 240 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1□□□□□ -2.25
RPAP1Q9BWH6 AC023157.2-201ENST00000540596 141 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1□□□□□ -2.25
RPAP1Q9BWH6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1□□□□□ -2.25
RPAP1Q9BWH6 AL513534.2-201ENST00000603836 250 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 BX284668.6-201ENST00000606899 438 ntBASIC1□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.9-201ENST00000362354 101 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 SNORD114-2-201ENST00000363953 78 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 RNU6-831P-201ENST00000384548 107 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.554-201ENST00000384672 102 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 AL589823.1-201ENST00000429577 183 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 MTND3P23-201ENST00000431980 347 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 MTATP6P26-201ENST00000445926 662 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 SNORD116-28-201ENST00000516123 91 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 RNU6-1314P-201ENST00000517139 104 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 AC007742.2-201ENST00000618226 398 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 AC006435.5-201ENST00000624486 112 ntBASIC0.99□□□□□ -2.25
RPAP1Q9BWH6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.436-201ENST00000384097 102 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 SNORA70.7-201ENST00000384159 133 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.490-201ENST00000384413 102 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 RNU6-505P-201ENST00000384427 107 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 MIR660-201ENST00000385235 97 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 USP9YP30-201ENST00000430729 455 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 MRPS10P1-201ENST00000448483 130 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 RNU6-351P-201ENST00000516097 100 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.683-201ENST00000516508 93 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 RNU6-566P-201ENST00000516790 107 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 AC100810.6-201ENST00000638068 285 ntBASIC0.98□□□□□ -2.25
RPAP1Q9BWH6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.48-201ENST00000362710 103 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RNU6-1059P-201ENST00000363752 98 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RNU4-76P-201ENST00000364509 141 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 Y_RNA.295-201ENST00000364918 102 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RNU6-1013P-201ENST00000384180 107 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 MIR193B-201ENST00000384907 83 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RNU6-1148P-201ENST00000410992 104 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RAB28P5-201ENST00000427490 651 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RNU6-1114P-201ENST00000516022 107 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RNU6-922P-201ENST00000516753 99 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 SNORA70.22-201ENST00000517160 124 ntBASIC0.97□□□□□ -2.25
RPAP1Q9BWH6 RNU1-54P-201ENST00000517181 120 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms