Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 RN7SL691P-201ENST00000494487 301 ntBASIC3.75□□□□□ -1.81
USB1Q9BQ65 AC113410.1-201ENST00000505029 247 ntBASIC3.75□□□□□ -1.81
USB1Q9BQ65 RNU7-61P-201ENST00000515897 61 ntBASIC3.75□□□□□ -1.81
USB1Q9BQ65 AC006064.5-201ENST00000541782 248 ntBASIC3.75□□□□□ -1.81
USB1Q9BQ65 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.75□□□□□ -1.81
USB1Q9BQ65 AC022254.1-201ENST00000567857 235 ntBASIC3.75□□□□□ -1.81
USB1Q9BQ65 AL353149.1-201ENST00000610667 244 ntBASIC3.75□□□□□ -1.81
USB1Q9BQ65 MIR7515-201ENST00000637837 67 ntBASIC3.75□□□□□ -1.81
USB1Q9BQ65 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
USB1Q9BQ65 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USB1Q9BQ65 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
USB1Q9BQ65 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
USB1Q9BQ65 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.75□□□□□ -1.81
USB1Q9BQ65 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
USB1Q9BQ65 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USB1Q9BQ65 U8.5-201ENST00000364528 136 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 RNU4-16P-201ENST00000364737 141 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 SNORA8-201ENST00000384574 139 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 RPL21P3-201ENST00000395517 478 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 RNU2-48P-201ENST00000410694 191 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.74□□□□□ -1.81
USB1Q9BQ65 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.74□□□□□ -1.81
USB1Q9BQ65 AC004975.1-201ENST00000428733 208 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.74□□□□□ -1.81
USB1Q9BQ65 AC087499.4-201ENST00000448505 178 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 RPL39P39-201ENST00000455840 151 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 RPL35AP15-201ENST00000468042 339 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 RNU2-13P-201ENST00000515909 113 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 RNU6-711P-201ENST00000517255 106 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.74□□□□□ -1.81
USB1Q9BQ65 AC002984.1-201ENST00000591692 448 ntBASIC3.74□□□□□ -1.81
USB1Q9BQ65 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
USB1Q9BQ65 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USB1Q9BQ65 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USB1Q9BQ65 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
USB1Q9BQ65 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USB1Q9BQ65 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
USB1Q9BQ65 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
USB1Q9BQ65 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USB1Q9BQ65 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
USB1Q9BQ65 ZNF962P-201ENST00000443465 3140 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 RNU6-813P-201ENST00000384691 107 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 RNU6-644P-201ENST00000391155 98 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 RNA5SP246-201ENST00000458909 119 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 SNORD45.4-201ENST00000516629 73 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 AL138721.1-201ENST00000616756 179 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 AC087741.2-201ENST00000619415 172 ntBASIC3.73□□□□□ -1.81
USB1Q9BQ65 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.73□□□□□ -1.81
USB1Q9BQ65 AC008264.2-201ENST00000610193 3731 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USB1Q9BQ65 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USB1Q9BQ65 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
USB1Q9BQ65 Y_RNA.155-201ENST00000363632 101 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 RNA5SP387-201ENST00000364226 106 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 Y_RNA.336-201ENST00000365307 109 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 SNORA4.2-201ENST00000365313 147 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 RNU6-972P-201ENST00000391208 107 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.72□□□□□ -1.81
USB1Q9BQ65 GOT2P5-201ENST00000433995 546 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 CYCSP35-201ENST00000451978 304 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.72□□□□□ -1.81
USB1Q9BQ65 RNA5SP395-201ENST00000516567 118 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 SNORA48.11-201ENST00000517015 89 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 MIR3160-1-201ENST00000577972 85 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 MIR4694-201ENST00000578534 80 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 U7.3-201ENST00000616123 62 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 MIR7702-201ENST00000621931 59 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 AC012442.3-202ENST00000636742 206 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 ICE2P2-201ENST00000483823 2787 ntBASIC3.72□□□□□ -1.81
USB1Q9BQ65 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.72□□□□□ -1.81
USB1Q9BQ65 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USB1Q9BQ65 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.72□□□□□ -1.81
USB1Q9BQ65 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
USB1Q9BQ65 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.71□□□□□ -1.82
USB1Q9BQ65 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USB1Q9BQ65 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USB1Q9BQ65 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
USB1Q9BQ65 MIR342-201ENST00000362212 99 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 SNORA60-201ENST00000362396 134 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 RNU6-242P-201ENST00000384359 107 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 AL627390.1-201ENST00000396055 340 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.71□□□□□ -1.82
USB1Q9BQ65 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.71□□□□□ -1.82
USB1Q9BQ65 SNX2P2-201ENST00000424553 323 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 AC004941.2-201ENST00000427009 228 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 ARF4P2-201ENST00000430209 526 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 RNU6-162P-201ENST00000516228 103 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 RNU6-795P-201ENST00000516323 103 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 MIR3618-201ENST00000580330 88 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 AC078899.2-201ENST00000595282 212 ntBASIC3.71□□□□□ -1.82
USB1Q9BQ65 AC012531.4-201ENST00000616509 177 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms