Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
SSX3Q99909 Y_RNA.140-201ENST00000363474 103 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 SNORA20B-201ENST00000384220 132 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 Y_RNA.592-201ENST00000410274 109 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 RN7SKP200-201ENST00000410564 320 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 AL161935.2-201ENST00000414627 60 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.38□□□□□ -2.19
SSX3Q99909 RAB28P5-201ENST00000427490 651 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 AC245047.3-201ENST00000429428 127 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 AC027119.1-201ENST00000440877 241 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 SNORD13-201ENST00000459299 104 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 AC091951.2-201ENST00000500762 203 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.38□□□□□ -2.19
SSX3Q99909 AL132765.2-201ENST00000610812 351 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.38□□□□□ -2.19
SSX3Q99909 MIR3674-201ENST00000636576 68 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 AP000648.3-201ENST00000623539 4507 ntBASIC1.38□□□□□ -2.19
SSX3Q99909 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SSX3Q99909 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.38□□□□□ -2.19
SSX3Q99909 MIR410-201ENST00000362222 80 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 Y_RNA.303-201ENST00000364998 94 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 RNY4P36-201ENST00000391116 96 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 MRPL42P3-201ENST00000401492 326 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 AL355796.1-201ENST00000406706 323 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 Y_RNA.605-201ENST00000410577 105 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.37□□□□□ -2.19
SSX3Q99909 AC093019.1-201ENST00000443135 252 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 RNU7-169P-201ENST00000459456 61 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.37□□□□□ -2.19
SSX3Q99909 RNA5SP458-201ENST00000516188 119 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 AC073413.2-201ENST00000604332 360 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 AL078604.3-201ENST00000615580 211 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 MIR8054-201ENST00000620877 86 ntBASIC1.37□□□□□ -2.19
SSX3Q99909 SNORD33-201ENST00000362761 85 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 Y_RNA.314-201ENST00000365114 102 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 RNU6-407P-201ENST00000365280 104 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 MIR194-1-201ENST00000384892 85 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 RNU6-440P-201ENST00000390882 105 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 RNU11-5P-201ENST00000391216 129 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 AC004965.1-201ENST00000413033 213 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 MTCO3P19-201ENST00000415864 321 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.36□□□□□ -2.19
SSX3Q99909 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 ELOCP24-201ENST00000456370 334 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 Y_RNA.638-201ENST00000459374 113 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.36□□□□□ -2.19
SSX3Q99909 AC097462.1-201ENST00000514125 324 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 SNORA31.10-201ENST00000516482 106 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 RNU7-172P-201ENST00000517125 64 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 RPL21P9-201ENST00000556149 474 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 AC015688.6-201ENST00000577737 104 ntBASIC1.36□□□□□ -2.19
SSX3Q99909 AC018630.2-201ENST00000534866 2403 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 RNU6-490P-201ENST00000362985 107 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 RNU6-1310P-201ENST00000384153 107 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 SNORD116-29-201ENST00000384516 83 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 RNU6-1031P-201ENST00000384773 107 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 MRPS18CP6-201ENST00000423587 223 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.35□□□□□ -2.19
SSX3Q99909 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.35□□□□□ -2.19
SSX3Q99909 RNU6-408P-201ENST00000515910 100 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 RNA5SP20-201ENST00000515976 84 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 RNU6-875P-201ENST00000516488 106 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 Y_RNA.718-201ENST00000517110 102 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 AP002001.1-203ENST00000534002 267 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 AL442163.3-201ENST00000554110 156 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 AL355375.2-201ENST00000574825 175 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 MIR548S-201ENST00000581352 82 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 AC021506.2-201ENST00000612354 169 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 AC084781.2-201ENST00000615568 161 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 U6.115-201ENST00000636045 103 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 MTND5P10-201ENST00000603719 1809 ntBASIC1.35□□□□□ -2.19
SSX3Q99909 AC006026.1-201ENST00000444025 1803 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 RNU6-1123P-201ENST00000362347 106 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 SNORA27.1-201ENST00000362604 124 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 RNU1-22P-201ENST00000363334 158 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 RNY3P11-201ENST00000364153 102 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 RNU6-926P-201ENST00000384075 107 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 MIR513A1-201ENST00000385138 129 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 MIR628-201ENST00000385229 95 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 RNU6-1009P-201ENST00000390996 107 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 MTCO2P27-201ENST00000420740 428 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 AC018865.2-201ENST00000423631 129 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 AC099799.1-201ENST00000439809 192 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 MTND5P20-201ENST00000448677 143 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.34□□□□□ -2.19
SSX3Q99909 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.34□□□□□ -2.19
SSX3Q99909 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.34□□□□□ -2.19
SSX3Q99909 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.34□□□□□ -2.19
SSX3Q99909 AC008269.2-201ENST00000561915 1105 ntBASIC1.34□□□□□ -2.19
SSX3Q99909 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SSX3Q99909 Y_RNA.70-201ENST00000362886 110 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 RNU6-454P-201ENST00000364292 107 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 RNU6-1040P-201ENST00000383974 107 ntBASIC1.33□□□□□ -2.2
SSX3Q99909 MIR559-201ENST00000385188 96 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms