Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 U2.15-201ENST00000611544 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.16-201ENST00000613119 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.12-201ENST00000613778 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.9-201ENST00000615427 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.11-201ENST00000616345 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.2-201ENST00000616535 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.3-201ENST00000617785 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.19-201ENST00000618602 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 RNU2-1-201ENST00000618664 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.6-201ENST00000619225 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.5-201ENST00000619465 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 U2.10-201ENST00000620268 191 ntBASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HIST1H2AJQ99878 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 RNU6-1205P-201ENST00000363625 106 ntBASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 SNORA9-201ENST00000384215 133 ntBASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 RNU7-115P-201ENST00000516433 55 ntBASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 ELOCP29-201ENST00000588193 334 ntBASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 MIR548AY-201ENST00000617669 107 ntBASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 AC006435.5-201ENST00000624486 112 ntBASIC2.63□□□□□ -1.99
HIST1H2AJQ99878 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.7-201ENST00000362352 102 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 snoU2_19.4-201ENST00000364329 80 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.238-201ENST00000364441 102 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.240-201ENST00000364469 95 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.464-201ENST00000384282 110 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 MIR1253-201ENST00000408273 105 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 MIR1262-201ENST00000408276 93 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 NDUFA5P6-201ENST00000542110 379 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 MIR4438-201ENST00000585271 93 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 U2.20-201ENST00000613956 192 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 U6.106-201ENST00000636360 105 ntBASIC2.62□□□□□ -1.99
HIST1H2AJQ99878 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.24-201ENST00000362508 103 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 SNORD114-6-201ENST00000364393 72 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RNU1-112P-201ENST00000364401 164 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RNU6-117P-201ENST00000365415 107 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RNU6-136P-201ENST00000384663 107 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 SNORA8.3-201ENST00000384679 139 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 MIR626-201ENST00000385032 94 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 MIR9-1-201ENST00000385198 89 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RNU6-381P-201ENST00000391259 108 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RNA5SP511-201ENST00000410487 115 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 SRIP3-201ENST00000413200 219 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 AL135786.1-201ENST00000415892 214 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RPL23AP83-201ENST00000434984 473 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 HMGN2P34-201ENST00000437647 269 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RN7SL297P-201ENST00000483161 293 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RNU6-826P-201ENST00000516827 104 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 RNU6-255P-201ENST00000516957 105 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 MRPS18CP4-201ENST00000535821 231 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 AC074050.1-201ENST00000563247 211 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.802-201ENST00000614892 130 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 U4atac.1-201ENST00000618345 95 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 CENPCP1-201ENST00000533085 2578 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 AL365361.1-201ENST00000566942 3481 ntBASIC2.61□□□□□ -1.99
HIST1H2AJQ99878 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 RNU6-774P-201ENST00000363238 107 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 RNU1-22P-201ENST00000363334 158 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 RNU6-1072P-201ENST00000384703 107 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 RNU6-443P-201ENST00000384780 107 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 MIR483-201ENST00000385070 76 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 MIR548M-201ENST00000408260 86 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AC105272.1-201ENST00000438604 198 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AC107083.1-201ENST00000439643 279 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 RNU7-26P-201ENST00000458980 63 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AC011406.1-201ENST00000512440 370 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AC097462.1-201ENST00000514125 324 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AL137100.2-201ENST00000555786 315 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AC015720.1-201ENST00000565251 277 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 POLR3GP1-201ENST00000594073 261 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AC005972.2-201ENST00000604690 348 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 AC005000.2-201ENST00000605468 310 ntBASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HIST1H2AJQ99878 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.99-201ENST00000363138 105 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 Y_RNA.182-201ENST00000363880 111 ntBASIC2.59□□□□□ -1.99
HIST1H2AJQ99878 RNU6-969P-201ENST00000383900 105 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms