Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC025754.2-201ENST00000606491 432 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.46□□□□□ -2.02
TIMP4Q99727 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.46□□□□□ -2.02
TIMP4Q99727 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TIMP4Q99727 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TIMP4Q99727 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TIMP4Q99727 AL136360.1-201ENST00000503377 1900 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 Y_RNA.121-201ENST00000363309 113 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 RNU6-1205P-201ENST00000363625 106 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 RNU6-234P-201ENST00000365229 104 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 RNU6-969P-201ENST00000383900 105 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 MIR196B-201ENST00000384852 84 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 MIR300-201ENST00000401138 83 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 AL355796.1-201ENST00000406706 323 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 MIR548I2-201ENST00000408348 149 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 RNU6-57P-201ENST00000411348 103 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 RPL30P4-201ENST00000429309 333 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 AL121890.1-201ENST00000435457 205 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.45□□□□□ -2.02
TIMP4Q99727 RNU6-453P-201ENST00000516819 85 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 AC109329.2-201ENST00000519658 482 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 MIR4744-201ENST00000581563 82 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 MIR3199-1-201ENST00000582434 88 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 AL713866.2-201ENST00000603579 219 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 Y_RNA.802-201ENST00000614892 130 ntBASIC2.45□□□□□ -2.02
TIMP4Q99727 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TIMP4Q99727 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
TIMP4Q99727 Y_RNA.23-201ENST00000362496 106 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 RNU6-859P-201ENST00000362728 107 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 RNU1-72P-201ENST00000362976 153 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 RNU6-818P-201ENST00000364837 108 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 RNU6-418P-201ENST00000384035 107 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 SNORA20B-201ENST00000384220 132 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 MIR627-201ENST00000384979 97 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
TIMP4Q99727 Y_RNA.580-201ENST00000391004 95 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 AC074290.1-201ENST00000448883 135 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.44□□□□□ -2.02
TIMP4Q99727 AC245047.8-201ENST00000456455 284 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 AC117454.1-201ENST00000491120 168 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.44□□□□□ -2.02
TIMP4Q99727 RN7SKP164-201ENST00000516138 266 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 RNU6-1007P-201ENST00000516586 107 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 MTND1P7-201ENST00000632801 297 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 AC068647.2-201ENST00000637380 353 ntBASIC2.44□□□□□ -2.02
TIMP4Q99727 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TIMP4Q99727 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
TIMP4Q99727 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
TIMP4Q99727 RNU6-743P-201ENST00000364151 106 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 RNU6-151P-201ENST00000364158 107 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 RNU4-84P-201ENST00000364200 139 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 RNU6-275P-201ENST00000364910 107 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 U8.7-201ENST00000364940 136 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 RNU6-407P-201ENST00000365280 104 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 MIR592-201ENST00000384959 97 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 RNU6-578P-201ENST00000390980 103 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 CR769767.1-201ENST00000436337 346 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.43□□□□□ -2.02
TIMP4Q99727 AC114982.1-201ENST00000469402 321 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 AC096725.1-201ENST00000514266 313 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 SCARNA8-201ENST00000515924 131 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 RNU6-1337P-201ENST00000516525 95 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 SCARNA11.3-201ENST00000517276 130 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.43□□□□□ -2.02
TIMP4Q99727 AC013412.1-201ENST00000610687 192 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 snoZ196.1-201ENST00000625269 89 ntBASIC2.43□□□□□ -2.02
TIMP4Q99727 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TIMP4Q99727 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TIMP4Q99727 MIR449A-201ENST00000362113 91 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 Y_RNA.291-201ENST00000364886 113 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 Y_RNA.343-201ENST00000365354 112 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 Y_RNA.361-201ENST00000365515 120 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 RNU6-438P-201ENST00000365561 103 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 RNU6-975P-201ENST00000384296 105 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 Y_RNA.488-201ENST00000384403 102 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 Y_RNA.497-201ENST00000384447 98 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 MIR518C-201ENST00000384822 101 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 AL355497.1-201ENST00000406262 551 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 SNORD65B-201ENST00000459126 73 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 RNA5SP272-201ENST00000516095 111 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 SNORD116-25-201ENST00000516517 92 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 AC091895.1-201ENST00000624494 256 ntBASIC2.42□□□□□ -2.02
TIMP4Q99727 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
TIMP4Q99727 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TIMP4Q99727 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TIMP4Q99727 SNORD31B-201ENST00000364977 69 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 SNORD50.2-201ENST00000365465 70 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 Y_RNA.400-201ENST00000383963 111 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 SNORD116-13-201ENST00000384408 92 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 MT-TT-201ENST00000387460 66 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 RNU6-131P-201ENST00000391144 107 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 MIR873-201ENST00000401120 77 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 RNU6-383P-201ENST00000410864 94 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 AC092427.1-202ENST00000430569 476 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 RPL23AP7-203ENST00000449021 469 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 AL137159.1-201ENST00000452808 512 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 AC010409.1-201ENST00000487382 476 ntBASIC2.41□□□□□ -2.02
TIMP4Q99727 CKS1BP2-201ENST00000497342 240 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 185.9 ms